Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC1.58□□□□□ -2.16
CSMD3Q7Z407 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CSMD3Q7Z407 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
CSMD3Q7Z407 AL512430.2-201ENST00000406786 339 ntBASIC1.58□□□□□ -2.16
CSMD3Q7Z407 AL451074.3-201ENST00000437709 472 ntBASIC1.58□□□□□ -2.16
CSMD3Q7Z407 AC007395.1-201ENST00000451333 677 ntBASIC1.58□□□□□ -2.16
CSMD3Q7Z407 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
CSMD3Q7Z407 AC147055.1-201ENST00000509261 750 ntBASIC1.58□□□□□ -2.16
CSMD3Q7Z407 TXNP6-201ENST00000510190 310 ntBASIC1.58□□□□□ -2.16
CSMD3Q7Z407 RNA5SP200-201ENST00000516360 103 ntBASIC1.58□□□□□ -2.16
CSMD3Q7Z407 AF186190.1-201ENST00000517470 480 ntBASIC1.58□□□□□ -2.16
CSMD3Q7Z407 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC1.58□□□□□ -2.16
CSMD3Q7Z407 OR4T1P-201ENST00000554933 911 ntBASIC1.58□□□□□ -2.16
CSMD3Q7Z407 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.58□□□□□ -2.16
CSMD3Q7Z407 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.58□□□□□ -2.16
CSMD3Q7Z407 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC1.58□□□□□ -2.16
CSMD3Q7Z407 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
CSMD3Q7Z407 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.58□□□□□ -2.16
CSMD3Q7Z407 AC011978.2-201ENST00000569835 2054 ntBASIC1.58□□□□□ -2.16
CSMD3Q7Z407 OR52B1P-201ENST00000316506 909 ntBASIC1.58□□□□□ -2.16
CSMD3Q7Z407 AL512633.1-201ENST00000399931 655 ntBASIC1.58□□□□□ -2.16
CSMD3Q7Z407 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
CSMD3Q7Z407 CR769767.1-201ENST00000436337 346 ntBASIC1.58□□□□□ -2.16
CSMD3Q7Z407 OR4H12P-201ENST00000556269 907 ntBASIC1.58□□□□□ -2.16
CSMD3Q7Z407 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
CSMD3Q7Z407 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
CSMD3Q7Z407 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC1.58□□□□□ -2.16
CSMD3Q7Z407 AL139276.1-201ENST00000311910 1001 ntBASIC1.57□□□□□ -2.16
CSMD3Q7Z407 AL034379.1-201ENST00000423216 253 ntBASIC1.57□□□□□ -2.16
CSMD3Q7Z407 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CSMD3Q7Z407 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC1.57□□□□□ -2.16
CSMD3Q7Z407 MOB1AP2-201ENST00000446060 614 ntBASIC1.57□□□□□ -2.16
CSMD3Q7Z407 AC021269.2-201ENST00000532318 330 ntBASIC1.57□□□□□ -2.16
CSMD3Q7Z407 AC106730.3-201ENST00000624568 641 ntBASIC1.57□□□□□ -2.16
CSMD3Q7Z407 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC1.57□□□□□ -2.16
CSMD3Q7Z407 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC1.57□□□□□ -2.16
CSMD3Q7Z407 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CSMD3Q7Z407 AC008264.2-201ENST00000610193 3731 ntBASIC1.57□□□□□ -2.16
CSMD3Q7Z407 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CSMD3Q7Z407 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CSMD3Q7Z407 MIR221-201ENST00000385135 110 ntBASIC1.57□□□□□ -2.16
CSMD3Q7Z407 RNU2-68P-201ENST00000410878 191 ntBASIC1.57□□□□□ -2.16
CSMD3Q7Z407 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CSMD3Q7Z407 TVP23BP2-201ENST00000455082 615 ntBASIC1.57□□□□□ -2.16
CSMD3Q7Z407 AC233279.1-201ENST00000455300 423 ntBASIC1.57□□□□□ -2.16
CSMD3Q7Z407 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.57□□□□□ -2.16
CSMD3Q7Z407 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.57□□□□□ -2.16
CSMD3Q7Z407 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CSMD3Q7Z407 AC131238.1-201ENST00000617135 328 ntBASIC1.57□□□□□ -2.16
CSMD3Q7Z407 AC006378.2-201ENST00000623178 2476 ntBASIC1.57□□□□□ -2.16
CSMD3Q7Z407 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
CSMD3Q7Z407 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.57□□□□□ -2.16
CSMD3Q7Z407 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CSMD3Q7Z407 AL390023.1-201ENST00000428836 262 ntBASIC1.57□□□□□ -2.16
CSMD3Q7Z407 AC009238.1-201ENST00000442165 424 ntBASIC1.57□□□□□ -2.16
CSMD3Q7Z407 AC009237.6-201ENST00000446969 424 ntBASIC1.57□□□□□ -2.16
CSMD3Q7Z407 AC125238.1-201ENST00000448842 249 ntBASIC1.57□□□□□ -2.16
CSMD3Q7Z407 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.57□□□□□ -2.16
CSMD3Q7Z407 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CSMD3Q7Z407 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CSMD3Q7Z407 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
CSMD3Q7Z407 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CSMD3Q7Z407 RNU6-582P-201ENST00000362989 107 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.56□□□□□ -2.16
CSMD3Q7Z407 HSPD1P16-201ENST00000402302 394 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 RNU6-1140P-201ENST00000410517 106 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 RN7SKP247-201ENST00000411094 308 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 AC105402.2-201ENST00000438503 358 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.56□□□□□ -2.16
CSMD3Q7Z407 AC011753.1-201ENST00000451001 220 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 POU5F1P7-201ENST00000508759 541 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.56□□□□□ -2.16
CSMD3Q7Z407 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC1.56□□□□□ -2.16
CSMD3Q7Z407 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.56□□□□□ -2.16
CSMD3Q7Z407 MIR5092-201ENST00000583139 88 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 AC083760.1-201ENST00000589621 670 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 AL139811.1-201ENST00000424779 2299 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 MTND5P23-201ENST00000430812 1655 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.56□□□□□ -2.16
CSMD3Q7Z407 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CSMD3Q7Z407 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CSMD3Q7Z407 MIR21-201ENST00000362134 72 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 RNU1-100P-201ENST00000365255 165 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CSMD3Q7Z407 RPS20P25-201ENST00000412447 352 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 AC013470.3-201ENST00000420252 1194 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 AC012498.1-201ENST00000424037 437 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 AC004263.1-201ENST00000479327 332 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC1.56□□□□□ -2.16
CSMD3Q7Z407 AC069234.5-201ENST00000611056 416 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CSMD3Q7Z407 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CSMD3Q7Z407 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CSMD3Q7Z407 AL162578.1-201ENST00000406202 378 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC1.56□□□□□ -2.16
CSMD3Q7Z407 AC004866.2-201ENST00000438285 481 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 AC104389.3-201ENST00000445629 235 ntBASIC1.56□□□□□ -2.16
CSMD3Q7Z407 AP001207.1-201ENST00000524051 481 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms