Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.83□□□□□ -1.8
TMEM88Q6PEY1 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
TMEM88Q6PEY1 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
TMEM88Q6PEY1 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TMEM88Q6PEY1 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TMEM88Q6PEY1 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TMEM88Q6PEY1 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AL391684.1-202ENST00000641293 1636 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 MIR133B-201ENST00000362210 119 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 Y_RNA.372-201ENST00000365599 102 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 Y_RNA.409-201ENST00000383990 98 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 SNORA16A-201ENST00000384342 137 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 RNU6-171P-201ENST00000384354 107 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 SNORD3H-201ENST00000384486 214 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 RNU6-278P-201ENST00000390945 109 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 MIR921-201ENST00000401133 56 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 HSPA8P15-201ENST00000401676 786 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AL133388.1-201ENST00000404509 287 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 MIR1178-201ENST00000408396 91 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 RPS7P15-201ENST00000415804 584 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 RAD23BP2-201ENST00000416003 1207 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 CCDC58P2-201ENST00000417131 366 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 Z74021.1-201ENST00000423610 407 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 SRSF1P1-201ENST00000424058 520 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 MTCO2P11-201ENST00000431069 680 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 HLA-N-201ENST00000437516 135 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 RPS11P7-201ENST00000442125 465 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AL163193.1-201ENST00000444895 788 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 COPS8P2-201ENST00000473228 627 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 RN7SL799P-201ENST00000475891 298 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AC004924.1-201ENST00000480160 781 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 RN7SL441P-201ENST00000492388 296 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AC108022.1-201ENST00000493466 478 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AC146944.2-203ENST00000502493 354 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 FTH1P21-201ENST00000512179 511 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AC139495.1-202ENST00000513164 354 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AC103783.1-201ENST00000520506 373 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AC022616.3-201ENST00000523940 148 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AP004371.1-201ENST00000525240 214 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 DEFB108D-201ENST00000527787 222 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AC135001.1-201ENST00000544546 283 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AL352979.3-201ENST00000553515 247 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 SNRPGP15-201ENST00000600149 222 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AC025946.2-201ENST00000603398 234 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AL592295.2-201ENST00000612578 206 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 MIR4727-201ENST00000622232 55 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 AC244258.1-201ENST00000637553 1071 ntBASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
TMEM88Q6PEY1 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AC067945.1-201ENST00000342609 618 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 RNU6-1074P-201ENST00000383995 104 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 RPL17P50-201ENST00000396131 546 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 RN7SKP159-201ENST00000410657 292 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AC069157.1-201ENST00000421749 137 ntBASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC3.81□□□□□ -1.8
TMEM88Q6PEY1 AL359073.1-201ENST00000448036 403 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms