Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AC020765.1-201ENST00000604296 328 ntBASIC6.1□□□□□ -1.43
PTCRAQ6ISU1 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.1□□□□□ -1.43
PTCRAQ6ISU1 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCRAQ6ISU1 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PTCRAQ6ISU1 MAPK10-270ENST00000641102 3538 ntBASIC6.1□□□□□ -1.43
PTCRAQ6ISU1 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.1□□□□□ -1.43
PTCRAQ6ISU1 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.1□□□□□ -1.43
PTCRAQ6ISU1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC6.1□□□□□ -1.43
PTCRAQ6ISU1 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
PTCRAQ6ISU1 AC007842.1-201ENST00000597336 2039 ntBASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 AC092079.1-201ENST00000558620 1985 ntBASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 Y_RNA.48-201ENST00000362710 103 ntBASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 RNU1-24P-201ENST00000364285 165 ntBASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 Y_RNA.277-201ENST00000364754 102 ntBASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 RNU4-65P-201ENST00000410473 140 ntBASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 AC096921.1-201ENST00000411661 375 ntBASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 AC016397.1-201ENST00000412463 242 ntBASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 AL133173.1-201ENST00000423458 397 ntBASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 CYCSP6-201ENST00000434498 302 ntBASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 snoU13.7-201ENST00000459220 104 ntBASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 RPS18P6-201ENST00000476880 458 ntBASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 RPS29P26-201ENST00000477483 171 ntBASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 Y_RNA.689-201ENST00000516589 107 ntBASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 RNU6-347P-201ENST00000516658 105 ntBASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 ERHP1-201ENST00000523006 310 ntBASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 AC004584.2-201ENST00000570407 410 ntBASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 AL160281.1-201ENST00000605307 311 ntBASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 AC004832.4-201ENST00000608952 331 ntBASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 AC024255.1-201ENST00000614376 102 ntBASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 MIR6864-201ENST00000617935 70 ntBASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCRAQ6ISU1 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.44
PTCRAQ6ISU1 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
PTCRAQ6ISU1 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.44
PTCRAQ6ISU1 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.44
PTCRAQ6ISU1 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
PTCRAQ6ISU1 AC093849.1-201ENST00000563631 2209 ntBASIC6.09□□□□□ -1.44
PTCRAQ6ISU1 AC062029.1-202ENST00000606164 3651 ntBASIC6.09□□□□□ -1.44
PTCRAQ6ISU1 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 SNORD50.2-201ENST00000365465 70 ntBASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 RNU6-701P-201ENST00000384059 107 ntBASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 SNORD51-201ENST00000384320 80 ntBASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 SNORA69.1-201ENST00000390904 137 ntBASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 AL030996.1-201ENST00000411430 235 ntBASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 EIF1P2-201ENST00000428233 350 ntBASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 FABP5P2-201ENST00000439042 408 ntBASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 RPL7P49-201ENST00000471402 708 ntBASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 RPS29P22-201ENST00000472363 168 ntBASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 AC092824.1-201ENST00000483524 576 ntBASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 AC110792.1-201ENST00000491826 472 ntBASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 DEFB108E-201ENST00000524692 240 ntBASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 AP002392.1-201ENST00000537692 208 ntBASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 AL445647.2-201ENST00000615170 130 ntBASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PTCRAQ6ISU1 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTCRAQ6ISU1 AC112243.1-201ENST00000623949 3851 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms