Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL445363.3-201ENST00000623080 671 ntBASIC4.32□□□□□ -1.72
CCDC38Q502W7 MIR7641-1-201ENST00000627518 61 ntBASIC4.32□□□□□ -1.72
CCDC38Q502W7 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC38Q502W7 AC008013.2-202ENST00000637965 364 ntBASIC4.32□□□□□ -1.72
CCDC38Q502W7 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCDC38Q502W7 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC38Q502W7 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC38Q502W7 CR381670.1-201ENST00000624291 1693 ntBASIC4.32□□□□□ -1.72
CCDC38Q502W7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC38Q502W7 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
CCDC38Q502W7 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCDC38Q502W7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC38Q502W7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC38Q502W7 ZNF833P-201ENST00000424938 1494 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC38Q502W7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC38Q502W7 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC38Q502W7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC38Q502W7 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC38Q502W7 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC38Q502W7 AC139713.2-214ENST00000642059 1811 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CCDC38Q502W7 RNU6-853P-201ENST00000364306 107 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC38Q502W7 SNORD3H-201ENST00000384486 214 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 SNORA11F-201ENST00000408237 128 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 RPL7P8-201ENST00000411964 730 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC38Q502W7 BEND7P1-201ENST00000422058 457 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC38Q502W7 AL389915.1-201ENST00000422463 466 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 C4BPAP2-201ENST00000428434 478 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC38Q502W7 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC38Q502W7 RPL37P21-201ENST00000435890 276 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 AC108734.1-201ENST00000439549 399 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 RPL36AP33-201ENST00000450395 310 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 RPS27AP8-201ENST00000452665 445 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 KATNBL1P6-201ENST00000453433 915 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC38Q502W7 RN7SL98P-201ENST00000462271 300 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 AC010285.1-201ENST00000470580 392 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC38Q502W7 AC093278.1-201ENST00000494700 600 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC38Q502W7 OR5BM1P-201ENST00000512021 366 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC38Q502W7 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC38Q502W7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC38Q502W7 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC38Q502W7 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC38Q502W7 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC38Q502W7 ROCK1P1-201ENST00000573767 549 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC38Q502W7 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC38Q502W7 AC006254.3-201ENST00000603353 884 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 AC008745.1-201ENST00000604064 271 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 PRELID3BP8-201ENST00000604148 295 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC38Q502W7 TUG1_1.1-201ENST00000610654 145 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 AC026422.1-201ENST00000623961 452 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC38Q502W7 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC38Q502W7 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC38Q502W7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC38Q502W7 AC012321.1-201ENST00000561622 1588 ntBASIC4.31□□□□□ -1.72
CCDC38Q502W7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC38Q502W7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC38Q502W7 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC38Q502W7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC38Q502W7 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC38Q502W7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC38Q502W7 Y_RNA.97-201ENST00000363094 102 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 SNORA37-201ENST00000384504 129 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC38Q502W7 AL049693.1-201ENST00000402760 611 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 AL021407.1-201ENST00000404531 386 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 RNA5SP36-201ENST00000410197 133 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 RAB28P1-201ENST00000411517 641 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC38Q502W7 Z97055.1-201ENST00000419730 712 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC38Q502W7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC38Q502W7 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC38Q502W7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC38Q502W7 RPL23AP81-201ENST00000455252 467 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC38Q502W7 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC38Q502W7 KCTD9P2-201ENST00000512203 1013 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC38Q502W7 FTH1P9-201ENST00000513251 355 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC38Q502W7 AP003497.1-201ENST00000528472 562 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 AL356057.1-201ENST00000533798 831 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 TRAV8-5-201ENST00000537369 341 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC38Q502W7 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC38Q502W7 AL121766.1-201ENST00000547436 487 ntBASIC4.3□□□□□ -1.72
CCDC38Q502W7 AC063950.1-201ENST00000552036 308 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms