Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC125611.2-201ENST00000551907 647 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 AL163153.1-201ENST00000554223 283 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.46□□□□□ -1.86
SCN1BQ07699 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.46□□□□□ -1.86
SCN1BQ07699 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.46□□□□□ -1.86
SCN1BQ07699 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.46□□□□□ -1.86
SCN1BQ07699 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.46□□□□□ -1.86
SCN1BQ07699 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.46□□□□□ -1.86
SCN1BQ07699 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.46□□□□□ -1.86
SCN1BQ07699 AL353997.4-201ENST00000586196 166 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.46□□□□□ -1.86
SCN1BQ07699 AP001429.1-201ENST00000602568 530 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.46□□□□□ -1.86
SCN1BQ07699 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.46□□□□□ -1.86
SCN1BQ07699 AC009570.1-201ENST00000609599 745 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SCN1BQ07699 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SCN1BQ07699 AC002550.2-201ENST00000621246 394 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 AC011330.2-201ENST00000621680 635 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.46□□□□□ -1.86
SCN1BQ07699 AC006927.4-201ENST00000639187 543 ntBASIC3.46□□□□□ -1.86
SCN1BQ07699 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.86
SCN1BQ07699 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
SCN1BQ07699 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SCN1BQ07699 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.45□□□□□ -1.86
SCN1BQ07699 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
SCN1BQ07699 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SCN1BQ07699 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
SCN1BQ07699 MIR383-201ENST00000362257 73 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 SNORA4.1-201ENST00000364263 144 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
SCN1BQ07699 U1.1-201ENST00000384101 164 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 RN7SKP53-201ENST00000411337 315 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 ELOCP19-201ENST00000411919 318 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 RPL7AP73-201ENST00000413490 353 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.45□□□□□ -1.86
SCN1BQ07699 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.45□□□□□ -1.86
SCN1BQ07699 RPL17P36-201ENST00000420302 549 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.45□□□□□ -1.86
SCN1BQ07699 RPL31P12-201ENST00000422587 358 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 RPS27AP7-201ENST00000422792 455 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.45□□□□□ -1.86
SCN1BQ07699 AC233728.2-201ENST00000425348 757 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.45□□□□□ -1.86
SCN1BQ07699 ARF4P2-201ENST00000430209 526 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.45□□□□□ -1.86
SCN1BQ07699 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.45□□□□□ -1.86
SCN1BQ07699 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.45□□□□□ -1.86
SCN1BQ07699 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SCN1BQ07699 RPL26P6-201ENST00000440913 438 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 TXNP1-201ENST00000441872 371 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 RPS4XP4-201ENST00000443195 763 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.45□□□□□ -1.86
SCN1BQ07699 AL592447.1-201ENST00000447592 540 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.45□□□□□ -1.86
SCN1BQ07699 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.45□□□□□ -1.86
SCN1BQ07699 AC104563.1-201ENST00000476147 376 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.45□□□□□ -1.86
SCN1BQ07699 AC024589.1-201ENST00000512207 263 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 AC026801.2-201ENST00000515352 425 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 AC009643.1-201ENST00000532030 391 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 MTCO2P15-201ENST00000532655 656 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 PDCL2P2-201ENST00000533651 189 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.45□□□□□ -1.86
SCN1BQ07699 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.45□□□□□ -1.86
SCN1BQ07699 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.45□□□□□ -1.86
SCN1BQ07699 AC007448.1-201ENST00000582714 234 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.45□□□□□ -1.86
SCN1BQ07699 VN1R82P-201ENST00000601481 356 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 AL161729.3-201ENST00000603533 673 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 AC112220.3-201ENST00000605502 502 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.45□□□□□ -1.86
SCN1BQ07699 AC008443.7-201ENST00000622195 246 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.45□□□□□ -1.86
SCN1BQ07699 ZNF876P-202ENST00000398732 1485 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SCN1BQ07699 AC116667.1-201ENST00000604855 2072 ntBASIC3.45□□□□□ -1.86
SCN1BQ07699 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SCN1BQ07699 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SCN1BQ07699 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SCN1BQ07699 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SCN1BQ07699 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SCN1BQ07699 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SCN1BQ07699 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SCN1BQ07699 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.44□□□□□ -1.86
SCN1BQ07699 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.44□□□□□ -1.86
SCN1BQ07699 RNU6-744P-201ENST00000365557 107 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SCN1BQ07699 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SCN1BQ07699 RNU6-1316P-201ENST00000384242 108 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 FAT1P1-201ENST00000406588 507 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 AC245028.1-201ENST00000423259 256 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 OR5BE1P-201ENST00000425977 939 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.44□□□□□ -1.86
SCN1BQ07699 AL358472.1-201ENST00000431295 329 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.44□□□□□ -1.86
SCN1BQ07699 SNRPEP4-201ENST00000435815 279 ntBASIC3.44□□□□□ -1.86
SCN1BQ07699 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.44□□□□□ -1.86
SCN1BQ07699 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms