Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.46□□□□□ -1.54
SOX4Q06945 AC113194.1-201ENST00000606037 500 ntBASIC5.46□□□□□ -1.54
SOX4Q06945 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.46□□□□□ -1.54
SOX4Q06945 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX4Q06945 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.46□□□□□ -1.54
SOX4Q06945 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SOX4Q06945 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SOX4Q06945 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.46□□□□□ -1.54
SOX4Q06945 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SOX4Q06945 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SOX4Q06945 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.45□□□□□ -1.54
SOX4Q06945 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
SOX4Q06945 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.45□□□□□ -1.54
SOX4Q06945 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SOX4Q06945 AL049641.1-201ENST00000441055 1948 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
SOX4Q06945 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SOX4Q06945 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.45□□□□□ -1.54
SOX4Q06945 Y_RNA.5-201ENST00000362334 102 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 RNU6-1252P-201ENST00000363054 104 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 RNU6-97P-201ENST00000363387 104 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 Y_RNA.167-201ENST00000363735 109 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SOX4Q06945 RNU6-1032P-201ENST00000384100 107 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 RNU6-1029P-201ENST00000384109 107 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 SNORA77-201ENST00000408716 125 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
SOX4Q06945 RNU6-847P-201ENST00000411115 108 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 BX323014.1-201ENST00000412876 237 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 MED13P1-201ENST00000428342 171 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 AC009238.2-201ENST00000431026 355 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.45□□□□□ -1.54
SOX4Q06945 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.45□□□□□ -1.54
SOX4Q06945 MIR2053-201ENST00000459295 91 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 U8.20-201ENST00000459445 131 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 RN7SL244P-201ENST00000493405 297 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 TRBVA-201ENST00000498804 316 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 AC140172.1-201ENST00000502928 141 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SOX4Q06945 SNORA70.11-201ENST00000515987 138 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 SNORA70.13-201ENST00000516116 138 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 RNA5SP454-201ENST00000517231 127 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 AC011979.2-201ENST00000527568 352 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 AC021006.3-201ENST00000530771 192 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 OR4P1P-201ENST00000530808 1136 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 LSM3P2-201ENST00000551246 273 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 AL670379.11-201ENST00000604059 253 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 AL670379.10-201ENST00000604330 253 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 AL670379.12-201ENST00000605291 253 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 AL670379.9-201ENST00000605428 253 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 AC103710.2-201ENST00000609912 942 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 AL157817.1-201ENST00000614264 790 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 AC100827.5-201ENST00000615883 426 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 uc_338.34-201ENST00000617467 174 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 AC244100.1-202ENST00000621554 382 ntBASIC5.45□□□□□ -1.54
SOX4Q06945 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.45□□□□□ -1.54
SOX4Q06945 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.45□□□□□ -1.54
SOX4Q06945 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SOX4Q06945 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SOX4Q06945 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.45□□□□□ -1.54
SOX4Q06945 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SOX4Q06945 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.45□□□□□ -1.54
SOX4Q06945 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
SOX4Q06945 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
SOX4Q06945 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SOX4Q06945 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SOX4Q06945 AC010266.2-201ENST00000564741 3255 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.44□□□□□ -1.54
SOX4Q06945 Y_RNA.234-201ENST00000364409 97 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
SOX4Q06945 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.44□□□□□ -1.54
SOX4Q06945 SNORA48.4-201ENST00000391089 134 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.44□□□□□ -1.54
SOX4Q06945 HMGB3P2-201ENST00000411913 584 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SOX4Q06945 MCFD2P1-201ENST00000417812 300 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 AL139396.1-201ENST00000421137 167 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 AL360081.1-201ENST00000428299 555 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 FABP7P2-201ENST00000429946 379 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 UBE2V1P13-201ENST00000436983 439 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SOX4Q06945 AC104058.1-201ENST00000448028 297 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.44□□□□□ -1.54
SOX4Q06945 SNRPFP3-201ENST00000457792 225 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 snoU13.8-201ENST00000458890 104 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.44□□□□□ -1.54
SOX4Q06945 AC083982.1-201ENST00000485679 344 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SOX4Q06945 RPS27P27-201ENST00000498779 255 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SOX4Q06945 RNA5SP503-201ENST00000517047 117 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 MTND4P7-201ENST00000523876 130 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.44□□□□□ -1.54
SOX4Q06945 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.44□□□□□ -1.54
SOX4Q06945 AC109635.4-202ENST00000531666 412 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 AP000857.1-201ENST00000532151 543 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 AP000763.2-201ENST00000540641 163 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SOX4Q06945 AC010653.1-201ENST00000571108 881 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms