Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 MIR6868-201ENST00000611215 58 ntBASIC1.66□□□□□ -2.14
RPS28P62857 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RPS28P62857 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
RPS28P62857 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.66□□□□□ -2.14
RPS28P62857 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC1.66□□□□□ -2.14
RPS28P62857 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.66□□□□□ -2.14
RPS28P62857 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC1.66□□□□□ -2.14
RPS28P62857 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RPS28P62857 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.66□□□□□ -2.14
RPS28P62857 ZNF720P1-201ENST00000562403 1939 ntBASIC1.66□□□□□ -2.14
RPS28P62857 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC1.66□□□□□ -2.14
RPS28P62857 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC1.65□□□□□ -2.14
RPS28P62857 MIRLET7G-201ENST00000362280 84 ntBASIC1.65□□□□□ -2.15
RPS28P62857 RNA5SP197-201ENST00000363357 119 ntBASIC1.65□□□□□ -2.15
RPS28P62857 SNORA55-201ENST00000364587 135 ntBASIC1.65□□□□□ -2.15
RPS28P62857 FIG4-202ENST00000368941 791 ntTSL 3 BASIC1.65□□□□□ -2.15
RPS28P62857 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
RPS28P62857 AL035405.1-201ENST00000400795 710 ntBASIC1.65□□□□□ -2.15
RPS28P62857 AL355615.1-201ENST00000406187 641 ntBASIC1.65□□□□□ -2.15
RPS28P62857 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
RPS28P62857 RN7SKP27-201ENST00000410684 333 ntBASIC1.65□□□□□ -2.15
RPS28P62857 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.65□□□□□ -2.15
RPS28P62857 AC099548.1-201ENST00000421443 426 ntBASIC1.65□□□□□ -2.15
RPS28P62857 HMGN2P19-201ENST00000425149 265 ntBASIC1.65□□□□□ -2.15
RPS28P62857 RBMY2QP-201ENST00000429799 1147 ntBASIC1.65□□□□□ -2.15
RPS28P62857 AC004383.1-201ENST00000438135 289 ntBASIC1.65□□□□□ -2.15
RPS28P62857 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.65□□□□□ -2.15
RPS28P62857 RAC1P7-201ENST00000445367 377 ntBASIC1.65□□□□□ -2.15
RPS28P62857 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC1.65□□□□□ -2.15
RPS28P62857 RPS11P1-201ENST00000451072 473 ntBASIC1.65□□□□□ -2.15
RPS28P62857 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.65□□□□□ -2.15
RPS28P62857 AC091685.2-201ENST00000454924 864 ntBASIC1.65□□□□□ -2.15
RPS28P62857 AC140172.1-201ENST00000502928 141 ntBASIC1.65□□□□□ -2.15
RPS28P62857 SUMO2P6-201ENST00000505273 288 ntBASIC1.65□□□□□ -2.15
RPS28P62857 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.65□□□□□ -2.15
RPS28P62857 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC1.65□□□□□ -2.15
RPS28P62857 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC1.65□□□□□ -2.15
RPS28P62857 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
RPS28P62857 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC1.65□□□□□ -2.15
RPS28P62857 AL133271.1-201ENST00000538229 291 ntBASIC1.65□□□□□ -2.15
RPS28P62857 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.65□□□□□ -2.15
RPS28P62857 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.65□□□□□ -2.15
RPS28P62857 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.65□□□□□ -2.15
RPS28P62857 TVP23BP1-201ENST00000557500 617 ntBASIC1.65□□□□□ -2.15
RPS28P62857 AC074051.3-201ENST00000570238 358 ntBASIC1.65□□□□□ -2.15
RPS28P62857 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC1.65□□□□□ -2.15
RPS28P62857 MIR3921-201ENST00000577308 85 ntBASIC1.65□□□□□ -2.15
RPS28P62857 MIR4691-201ENST00000583764 85 ntBASIC1.65□□□□□ -2.15
RPS28P62857 AC011447.4-201ENST00000587562 111 ntBASIC1.65□□□□□ -2.15
RPS28P62857 AC025165.5-201ENST00000602802 578 ntBASIC1.65□□□□□ -2.15
RPS28P62857 AC021749.1-201ENST00000604322 607 ntBASIC1.65□□□□□ -2.15
RPS28P62857 AC124916.2-201ENST00000604416 224 ntBASIC1.65□□□□□ -2.15
RPS28P62857 YPEL5P2-201ENST00000605553 359 ntBASIC1.65□□□□□ -2.15
RPS28P62857 AL133243.1-201ENST00000614487 366 ntBASIC1.65□□□□□ -2.15
RPS28P62857 MIR6721-201ENST00000617181 87 ntBASIC1.65□□□□□ -2.15
RPS28P62857 uc_338.20-201ENST00000621563 178 ntBASIC1.65□□□□□ -2.15
RPS28P62857 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.65□□□□□ -2.15
RPS28P62857 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.65□□□□□ -2.15
RPS28P62857 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC1.65□□□□□ -2.15
RPS28P62857 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC1.65□□□□□ -2.15
RPS28P62857 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
RPS28P62857 AC130650.2-201ENST00000618736 2403 ntBASIC1.65□□□□□ -2.15
RPS28P62857 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
RPS28P62857 AC011477.1-204ENST00000623416 1325 ntBASIC1.65□□□□□ -2.15
RPS28P62857 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
RPS28P62857 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
RPS28P62857 AC022306.1-201ENST00000560489 1562 ntBASIC1.64□□□□□ -2.15
RPS28P62857 MTND5P31-201ENST00000419366 1374 ntBASIC1.64□□□□□ -2.15
RPS28P62857 SNURFL-201ENST00000309296 343 ntBASIC1.64□□□□□ -2.15
RPS28P62857 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC1.64□□□□□ -2.15
RPS28P62857 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
RPS28P62857 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
RPS28P62857 RNA5SP229-201ENST00000410809 99 ntBASIC1.64□□□□□ -2.15
RPS28P62857 AC092745.2-202ENST00000411880 369 ntBASIC1.64□□□□□ -2.15
RPS28P62857 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.64□□□□□ -2.15
RPS28P62857 AC245054.1-201ENST00000420944 258 ntBASIC1.64□□□□□ -2.15
RPS28P62857 AL138479.1-201ENST00000426913 484 ntBASIC1.64□□□□□ -2.15
RPS28P62857 RPSAP32-201ENST00000432681 526 ntBASIC1.64□□□□□ -2.15
RPS28P62857 AL512844.2-201ENST00000433990 593 ntBASIC1.64□□□□□ -2.15
RPS28P62857 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.64□□□□□ -2.15
RPS28P62857 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC1.64□□□□□ -2.15
RPS28P62857 RHOT1P3-201ENST00000436571 331 ntBASIC1.64□□□□□ -2.15
RPS28P62857 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC1.64□□□□□ -2.15
RPS28P62857 AC112492.1-201ENST00000449607 712 ntBASIC1.64□□□□□ -2.15
RPS28P62857 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.64□□□□□ -2.15
RPS28P62857 Z82190.1-201ENST00000454534 490 ntBASIC1.64□□□□□ -2.15
RPS28P62857 RANP1-206ENST00000455094 651 ntBASIC1.64□□□□□ -2.15
RPS28P62857 snoU109.4-201ENST00000458953 143 ntBASIC1.64□□□□□ -2.15
RPS28P62857 AC004890.1-201ENST00000461005 181 ntBASIC1.64□□□□□ -2.15
RPS28P62857 AC055731.1-201ENST00000474387 401 ntBASIC1.64□□□□□ -2.15
RPS28P62857 RN7SL174P-201ENST00000475578 289 ntBASIC1.64□□□□□ -2.15
RPS28P62857 RN7SL20P-201ENST00000488827 297 ntBASIC1.64□□□□□ -2.15
RPS28P62857 RPL23AP49-201ENST00000492925 468 ntBASIC1.64□□□□□ -2.15
RPS28P62857 HMGB3P17-201ENST00000504195 649 ntBASIC1.64□□□□□ -2.15
RPS28P62857 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC1.64□□□□□ -2.15
RPS28P62857 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC1.64□□□□□ -2.15
RPS28P62857 AC022447.3-201ENST00000506865 495 ntBASIC1.64□□□□□ -2.15
RPS28P62857 AC006390.1-201ENST00000508068 283 ntBASIC1.64□□□□□ -2.15
RPS28P62857 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.64□□□□□ -2.15
RPS28P62857 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms