Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.12□□□□□ -2.07
LSM3P62310 DUXAP4-201ENST00000603046 613 ntBASIC2.12□□□□□ -2.07
LSM3P62310 AL359535.1-201ENST00000612100 1087 ntBASIC2.12□□□□□ -2.07
LSM3P62310 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.12□□□□□ -2.07
LSM3P62310 U6.48-201ENST00000618523 106 ntBASIC2.12□□□□□ -2.07
LSM3P62310 AP000553.5-201ENST00000641933 54 ntBASIC2.12□□□□□ -2.07
LSM3P62310 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.12□□□□□ -2.07
LSM3P62310 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
LSM3P62310 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.12□□□□□ -2.07
LSM3P62310 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LSM3P62310 AC007336.1-201ENST00000576365 3828 ntBASIC2.11□□□□□ -2.07
LSM3P62310 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
LSM3P62310 AL161912.2-201ENST00000565707 3007 ntBASIC2.11□□□□□ -2.07
LSM3P62310 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.11□□□□□ -2.07
LSM3P62310 AC097714.1-201ENST00000511272 1647 ntBASIC2.11□□□□□ -2.07
LSM3P62310 SNORD114-30-201ENST00000364448 72 ntBASIC2.11□□□□□ -2.07
LSM3P62310 RNA5SP267-201ENST00000364893 126 ntBASIC2.11□□□□□ -2.07
LSM3P62310 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LSM3P62310 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LSM3P62310 AL138885.1-201ENST00000405921 675 ntBASIC2.11□□□□□ -2.07
LSM3P62310 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.11□□□□□ -2.07
LSM3P62310 MTND1P23-201ENST00000416931 372 ntBASIC2.11□□□□□ -2.07
LSM3P62310 MTCYBP24-201ENST00000420387 1106 ntBASIC2.11□□□□□ -2.07
LSM3P62310 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.11□□□□□ -2.07
LSM3P62310 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.11□□□□□ -2.07
LSM3P62310 RPS15AP7-201ENST00000439294 405 ntBASIC2.11□□□□□ -2.07
LSM3P62310 AL035407.2-201ENST00000454090 378 ntBASIC2.11□□□□□ -2.07
LSM3P62310 RPL23AP45-201ENST00000476406 468 ntBASIC2.11□□□□□ -2.07
LSM3P62310 GAPDHP39-201ENST00000481866 979 ntBASIC2.11□□□□□ -2.07
LSM3P62310 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LSM3P62310 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.11□□□□□ -2.07
LSM3P62310 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.11□□□□□ -2.07
LSM3P62310 RN7SKP157-201ENST00000516174 282 ntBASIC2.11□□□□□ -2.07
LSM3P62310 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.11□□□□□ -2.07
LSM3P62310 AP002812.4-201ENST00000532139 286 ntBASIC2.11□□□□□ -2.07
LSM3P62310 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.11□□□□□ -2.07
LSM3P62310 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.11□□□□□ -2.07
LSM3P62310 RPL23AP84-201ENST00000571193 464 ntBASIC2.11□□□□□ -2.07
LSM3P62310 ISCA1P3-201ENST00000577104 373 ntBASIC2.11□□□□□ -2.07
LSM3P62310 AC103810.1-201ENST00000579873 453 ntBASIC2.11□□□□□ -2.07
LSM3P62310 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.11□□□□□ -2.07
LSM3P62310 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.11□□□□□ -2.07
LSM3P62310 AC068831.8-201ENST00000620171 435 ntBASIC2.11□□□□□ -2.07
LSM3P62310 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.11□□□□□ -2.07
LSM3P62310 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
LSM3P62310 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LSM3P62310 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.1□□□□□ -2.07
LSM3P62310 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LSM3P62310 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LSM3P62310 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LSM3P62310 SNORD56.5-201ENST00000364281 72 ntBASIC2.1□□□□□ -2.07
LSM3P62310 RNA5SP479-201ENST00000364858 117 ntBASIC2.1□□□□□ -2.07
LSM3P62310 RNU6-1181P-201ENST00000384191 106 ntBASIC2.1□□□□□ -2.07
LSM3P62310 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LSM3P62310 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.1□□□□□ -2.07
LSM3P62310 BX682237.1-201ENST00000415016 335 ntBASIC2.1□□□□□ -2.07
LSM3P62310 BTF3P9-201ENST00000418784 283 ntBASIC2.1□□□□□ -2.07
LSM3P62310 AL645937.1-202ENST00000421799 937 ntBASIC2.1□□□□□ -2.07
LSM3P62310 RPL35AP12-201ENST00000425362 338 ntBASIC2.1□□□□□ -2.07
LSM3P62310 UBE2V1P1-201ENST00000430836 445 ntBASIC2.1□□□□□ -2.07
LSM3P62310 UBE2V1P6-201ENST00000430840 422 ntBASIC2.1□□□□□ -2.07
LSM3P62310 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LSM3P62310 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LSM3P62310 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.1□□□□□ -2.07
LSM3P62310 LINC00888-204ENST00000487386 421 ntBASIC2.1□□□□□ -2.07
LSM3P62310 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.1□□□□□ -2.07
LSM3P62310 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.1□□□□□ -2.07
LSM3P62310 SNORA31.1-201ENST00000515993 133 ntBASIC2.1□□□□□ -2.07
LSM3P62310 SNORA31.5-201ENST00000516190 133 ntBASIC2.1□□□□□ -2.07
LSM3P62310 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.1□□□□□ -2.07
LSM3P62310 AP000790.1-201ENST00000528891 737 ntBASIC2.1□□□□□ -2.07
LSM3P62310 AC113368.1-201ENST00000603736 382 ntBASIC2.1□□□□□ -2.07
LSM3P62310 AC067747.1-201ENST00000608026 250 ntBASIC2.1□□□□□ -2.07
LSM3P62310 AC006249.1-201ENST00000621223 471 ntBASIC2.1□□□□□ -2.07
LSM3P62310 AC006963.1-201ENST00000624003 1052 ntBASIC2.1□□□□□ -2.07
LSM3P62310 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.1□□□□□ -2.07
LSM3P62310 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.1□□□□□ -2.07
LSM3P62310 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LSM3P62310 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LSM3P62310 AL359893.1-201ENST00000447628 1580 ntBASIC2.1□□□□□ -2.07
LSM3P62310 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.1□□□□□ -2.07
LSM3P62310 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.1□□□□□ -2.07
LSM3P62310 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
LSM3P62310 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LSM3P62310 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LSM3P62310 RNU6-673P-201ENST00000365084 104 ntBASIC2.09□□□□□ -2.07
LSM3P62310 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.09□□□□□ -2.07
LSM3P62310 RNU6-452P-201ENST00000384406 107 ntBASIC2.09□□□□□ -2.07
LSM3P62310 MIR200C-201ENST00000384980 68 ntBASIC2.09□□□□□ -2.07
LSM3P62310 MIR1193-201ENST00000408109 78 ntBASIC2.09□□□□□ -2.07
LSM3P62310 METTL5-204ENST00000409340 472 ntTSL 5 BASIC2.09□□□□□ -2.07
LSM3P62310 AC105402.1-201ENST00000413336 545 ntBASIC2.09□□□□□ -2.07
LSM3P62310 ATG3P1-201ENST00000419507 911 ntBASIC2.09□□□□□ -2.07
LSM3P62310 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.09□□□□□ -2.07
LSM3P62310 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.09□□□□□ -2.07
LSM3P62310 RPL7P37-201ENST00000425095 738 ntBASIC2.09□□□□□ -2.07
LSM3P62310 AC104389.3-201ENST00000445629 235 ntBASIC2.09□□□□□ -2.07
LSM3P62310 PRDX3P3-201ENST00000447765 522 ntBASIC2.09□□□□□ -2.07
LSM3P62310 AL031183.1-201ENST00000457667 207 ntBASIC2.09□□□□□ -2.07
LSM3P62310 AC104629.2-201ENST00000468627 598 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms