Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN2P57739 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.92□□□□□ -1.78
CLDN2P57739 AC074029.4-201ENST00000624796 1859 ntBASIC3.92□□□□□ -1.78
CLDN2P57739 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CLDN2P57739 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.91□□□□□ -1.78
CLDN2P57739 MTND5P3-201ENST00000438536 1800 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN2P57739 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CLDN2P57739 RNA5SP52-201ENST00000362448 134 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 Y_RNA.51-201ENST00000362725 102 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 RNU6-343P-201ENST00000364709 104 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 Y_RNA.493-201ENST00000384422 102 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 MIR513A2-201ENST00000385249 127 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 RNU6-821P-201ENST00000390995 107 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 AL390237.1-201ENST00000404226 1415 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 MTCO1P17-201ENST00000411522 491 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.91□□□□□ -1.78
CLDN2P57739 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN2P57739 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN2P57739 AC016907.1-201ENST00000419483 435 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN2P57739 CYCSP46-201ENST00000423569 204 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 AC007742.1-201ENST00000425789 329 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 AC006548.1-201ENST00000427470 102 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN2P57739 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN2P57739 RPL37P21-201ENST00000435890 276 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 ELOCP26-201ENST00000436067 329 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN2P57739 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.91□□□□□ -1.78
CLDN2P57739 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN2P57739 TAF9P1-201ENST00000445421 515 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 AL360221.1-201ENST00000445989 335 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 VN1R34P-201ENST00000447387 883 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 AL133547.1-201ENST00000448546 220 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 FABP3P2-201ENST00000453169 399 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 TAF9P2-201ENST00000454958 515 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 MTCO2P18-201ENST00000457151 658 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 snoU109.4-201ENST00000458953 143 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 AC034159.1-201ENST00000513885 583 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 AC093677.1-201ENST00000514414 678 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN2P57739 AC013828.2-201ENST00000532487 235 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN2P57739 AC024224.1-201ENST00000538284 609 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.91□□□□□ -1.78
CLDN2P57739 AC091489.2-201ENST00000566263 604 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 CYP4A43P-201ENST00000568156 121 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 AC007599.1-201ENST00000568688 1174 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 AC090615.1-201ENST00000577519 154 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN2P57739 AC083760.1-201ENST00000589621 670 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 AC004223.2-201ENST00000590309 544 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 U73023.1-201ENST00000603134 700 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 PRELID3BP8-201ENST00000604148 295 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN2P57739 AC103710.4-201ENST00000609301 899 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN2P57739 AC006329.2-201ENST00000611491 394 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN2P57739 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN2P57739 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN2P57739 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN2P57739 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CLDN2P57739 AC006378.2-201ENST00000623178 2476 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 AC006065.5-201ENST00000623427 349 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 CR381572.1-201ENST00000625098 102 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN2P57739 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CLDN2P57739 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN2P57739 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN2P57739 ZNF962P-201ENST00000443465 3140 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 AC090337.1-201ENST00000579651 2074 ntBASIC3.91□□□□□ -1.78
CLDN2P57739 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN2P57739 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CLDN2P57739 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CLDN2P57739 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CLDN2P57739 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
CLDN2P57739 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CLDN2P57739 AC000123.3-201ENST00000624029 4975 ntBASIC3.9□□□□□ -1.78
CLDN2P57739 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.9□□□□□ -1.78
CLDN2P57739 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
CLDN2P57739 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN2P57739 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN2P57739 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN2P57739 RNU1-108P-201ENST00000362556 161 ntBASIC3.9□□□□□ -1.79
CLDN2P57739 U3.4-201ENST00000363352 213 ntBASIC3.9□□□□□ -1.79
CLDN2P57739 RNU5F-7P-201ENST00000363696 115 ntBASIC3.9□□□□□ -1.79
CLDN2P57739 RNA5SP97-201ENST00000365006 84 ntBASIC3.9□□□□□ -1.79
CLDN2P57739 MIR200C-201ENST00000384980 68 ntBASIC3.9□□□□□ -1.79
CLDN2P57739 RAB9AP3-201ENST00000412737 573 ntBASIC3.9□□□□□ -1.79
CLDN2P57739 RPL17P12-201ENST00000413391 526 ntBASIC3.9□□□□□ -1.79
CLDN2P57739 AC109780.2-201ENST00000413467 845 ntBASIC3.9□□□□□ -1.79
CLDN2P57739 BTF3L4P1-201ENST00000413813 468 ntBASIC3.9□□□□□ -1.79
CLDN2P57739 RPS12P5-201ENST00000423449 371 ntBASIC3.9□□□□□ -1.79
CLDN2P57739 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.9□□□□□ -1.79
CLDN2P57739 VN1R108P-201ENST00000431580 830 ntBASIC3.9□□□□□ -1.79
CLDN2P57739 RSU1P2-202ENST00000437884 485 ntBASIC3.9□□□□□ -1.79
CLDN2P57739 NOTCH2P1-201ENST00000443481 624 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms