Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.96□□□□□ -1.94
CLDN6P56747 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.96□□□□□ -1.94
CLDN6P56747 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.96□□□□□ -1.94
CLDN6P56747 Z93242.1-201ENST00000427102 353 ntBASIC2.96□□□□□ -1.94
CLDN6P56747 AC073508.1-201ENST00000428866 656 ntBASIC2.96□□□□□ -1.94
CLDN6P56747 RNFT1P2-201ENST00000443064 757 ntBASIC2.96□□□□□ -1.94
CLDN6P56747 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.96□□□□□ -1.94
CLDN6P56747 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.96□□□□□ -1.94
CLDN6P56747 TPRKBP1-201ENST00000456243 481 ntBASIC2.96□□□□□ -1.94
CLDN6P56747 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.96□□□□□ -1.94
CLDN6P56747 RPL31P50-201ENST00000471002 296 ntBASIC2.96□□□□□ -1.94
CLDN6P56747 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.96□□□□□ -1.94
CLDN6P56747 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.96□□□□□ -1.94
CLDN6P56747 AC021146.5-201ENST00000503544 545 ntBASIC2.96□□□□□ -1.94
CLDN6P56747 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.96□□□□□ -1.94
CLDN6P56747 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.96□□□□□ -1.94
CLDN6P56747 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.96□□□□□ -1.94
CLDN6P56747 AL163153.1-201ENST00000554223 283 ntBASIC2.96□□□□□ -1.94
CLDN6P56747 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.96□□□□□ -1.94
CLDN6P56747 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.96□□□□□ -1.94
CLDN6P56747 MIR3162-201ENST00000581818 82 ntBASIC2.96□□□□□ -1.94
CLDN6P56747 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.96□□□□□ -1.94
CLDN6P56747 AL162574.2-201ENST00000614618 657 ntBASIC2.96□□□□□ -1.94
CLDN6P56747 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.96□□□□□ -1.94
CLDN6P56747 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.96□□□□□ -1.94
CLDN6P56747 MTCO1P6-201ENST00000481192 1384 ntBASIC2.96□□□□□ -1.94
CLDN6P56747 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CLDN6P56747 AC025263.3-201ENST00000622965 1396 ntBASIC2.96□□□□□ -1.94
CLDN6P56747 AC009487.2-201ENST00000420969 6821 ntBASIC2.96□□□□□ -1.94
CLDN6P56747 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CLDN6P56747 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CLDN6P56747 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.95□□□□□ -1.94
CLDN6P56747 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN6P56747 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN6P56747 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.95□□□□□ -1.94
CLDN6P56747 RNVU1-3-201ENST00000364313 161 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 RNU6-805P-201ENST00000365643 106 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 SNORD15B-201ENST00000384714 146 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 RPL31P1-201ENST00000398116 372 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN6P56747 MTCO3P31-201ENST00000405526 789 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 MIR1261-201ENST00000408659 82 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 RAD23BP2-201ENST00000416003 1207 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 AC245291.1-201ENST00000419501 328 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 AC012065.2-201ENST00000421295 375 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.95□□□□□ -1.94
CLDN6P56747 VN1R42P-201ENST00000424651 344 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 RPP40P1-201ENST00000426762 456 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 HMGN2P20-201ENST00000437531 273 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.95□□□□□ -1.94
CLDN6P56747 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.95□□□□□ -1.94
CLDN6P56747 MTND2P3-201ENST00000452458 470 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 RN7SL330P-201ENST00000469709 307 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.95□□□□□ -1.94
CLDN6P56747 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN6P56747 AC004062.1-201ENST00000509926 645 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.95□□□□□ -1.94
CLDN6P56747 TXNP6-201ENST00000510190 310 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 RNA5SP468-201ENST00000516782 93 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 IGJP1-201ENST00000522682 475 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CLDN6P56747 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.95□□□□□ -1.94
CLDN6P56747 MIR4474-201ENST00000579189 78 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 AL109653.1-201ENST00000603091 248 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.95□□□□□ -1.94
CLDN6P56747 AC245100.7-201ENST00000609678 442 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 AL390240.1-201ENST00000612950 384 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN6P56747 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
CLDN6P56747 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.95□□□□□ -1.94
CLDN6P56747 AC118273.1-201ENST00000525324 3006 ntBASIC2.95□□□□□ -1.94
CLDN6P56747 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.95□□□□□ -1.94
CLDN6P56747 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLDN6P56747 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLDN6P56747 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLDN6P56747 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLDN6P56747 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLDN6P56747 RPL7P26-201ENST00000333817 754 ntBASIC2.94□□□□□ -1.94
CLDN6P56747 RNA5SP258-201ENST00000362750 119 ntBASIC2.94□□□□□ -1.94
CLDN6P56747 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN6P56747 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN6P56747 AL139281.1-201ENST00000422120 335 ntBASIC2.94□□□□□ -1.94
CLDN6P56747 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.94□□□□□ -1.94
CLDN6P56747 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN6P56747 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.94□□□□□ -1.94
CLDN6P56747 CST9LP2-201ENST00000437612 320 ntBASIC2.94□□□□□ -1.94
CLDN6P56747 HIGD1AP11-201ENST00000438361 280 ntBASIC2.94□□□□□ -1.94
CLDN6P56747 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN6P56747 AL929288.2-201ENST00000446368 407 ntBASIC2.94□□□□□ -1.94
CLDN6P56747 AL034418.1-201ENST00000448675 860 ntBASIC2.94□□□□□ -1.94
CLDN6P56747 AC125238.1-201ENST00000448842 249 ntBASIC2.94□□□□□ -1.94
CLDN6P56747 AC112492.1-201ENST00000449607 712 ntBASIC2.94□□□□□ -1.94
CLDN6P56747 HMGN3P1-201ENST00000453847 193 ntBASIC2.94□□□□□ -1.94
CLDN6P56747 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.94□□□□□ -1.94
CLDN6P56747 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.94□□□□□ -1.94
CLDN6P56747 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.94□□□□□ -1.94
CLDN6P56747 OR5H5P-201ENST00000503164 928 ntBASIC2.94□□□□□ -1.94
CLDN6P56747 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.94□□□□□ -1.94
CLDN6P56747 RNA5SP367-201ENST00000516557 118 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms