Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.57□□□□□ -1.84
CDH11P55287 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDH11P55287 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH11P55287 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH11P55287 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.57□□□□□ -1.84
CDH11P55287 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.57□□□□□ -1.84
CDH11P55287 AC090229.1-201ENST00000590983 1609 ntBASIC3.57□□□□□ -1.84
CDH11P55287 AC022916.3-201ENST00000592961 742 ntBASIC3.57□□□□□ -1.84
CDH11P55287 AC015726.1-201ENST00000602353 681 ntBASIC3.57□□□□□ -1.84
CDH11P55287 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.57□□□□□ -1.84
CDH11P55287 RPL23AP92-201ENST00000603609 255 ntBASIC3.57□□□□□ -1.84
CDH11P55287 DUXAP11-201ENST00000603858 526 ntBASIC3.57□□□□□ -1.84
CDH11P55287 RNU6-88P-201ENST00000606801 100 ntBASIC3.57□□□□□ -1.84
CDH11P55287 AC064807.4-201ENST00000607201 407 ntBASIC3.57□□□□□ -1.84
CDH11P55287 AC090116.1-201ENST00000615679 446 ntBASIC3.57□□□□□ -1.84
CDH11P55287 MIR7151-201ENST00000617477 60 ntBASIC3.57□□□□□ -1.84
CDH11P55287 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDH11P55287 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH11P55287 CR381670.1-201ENST00000624291 1693 ntBASIC3.57□□□□□ -1.84
CDH11P55287 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH11P55287 AC092192.1-201ENST00000633154 1018 ntBASIC3.57□□□□□ -1.84
CDH11P55287 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH11P55287 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH11P55287 OR5BE1P-202ENST00000641168 1176 ntBASIC3.57□□□□□ -1.84
CDH11P55287 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.57□□□□□ -1.84
CDH11P55287 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH11P55287 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH11P55287 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH11P55287 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH11P55287 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH11P55287 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CDH11P55287 HSPA8P1-201ENST00000425843 1833 ntBASIC3.56□□□□□ -1.84
CDH11P55287 AL136964.1-201ENST00000622038 2990 ntBASIC3.56□□□□□ -1.84
CDH11P55287 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CDH11P55287 RPL23AP57-201ENST00000332361 466 ntBASIC3.56□□□□□ -1.84
CDH11P55287 RNU6-777P-201ENST00000364265 104 ntBASIC3.56□□□□□ -1.84
CDH11P55287 RNU6-723P-201ENST00000383973 107 ntBASIC3.56□□□□□ -1.84
CDH11P55287 MIR134-201ENST00000385258 73 ntBASIC3.56□□□□□ -1.84
CDH11P55287 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH11P55287 RPL31P1-201ENST00000398116 372 ntBASIC3.56□□□□□ -1.84
CDH11P55287 HLFP1-201ENST00000402375 499 ntBASIC3.56□□□□□ -1.84
CDH11P55287 MTND4LP20-201ENST00000402379 270 ntBASIC3.56□□□□□ -1.84
CDH11P55287 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH11P55287 RNU4-6P-201ENST00000410804 122 ntBASIC3.56□□□□□ -1.84
CDH11P55287 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH11P55287 FNDC3CP-201ENST00000420795 1155 ntBASIC3.56□□□□□ -1.84
CDH11P55287 OR51AB1P-201ENST00000429046 620 ntBASIC3.56□□□□□ -1.84
CDH11P55287 VN1R108P-201ENST00000431580 830 ntBASIC3.56□□□□□ -1.84
CDH11P55287 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH11P55287 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH11P55287 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CDH11P55287 AL356276.2-201ENST00000435919 558 ntBASIC3.56□□□□□ -1.84
CDH11P55287 USP9YP7-201ENST00000436723 430 ntBASIC3.56□□□□□ -1.84
CDH11P55287 LARP1BP3-201ENST00000437229 869 ntBASIC3.56□□□□□ -1.84
CDH11P55287 MTCYBP39-201ENST00000437562 491 ntBASIC3.56□□□□□ -1.84
CDH11P55287 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH11P55287 AC127537.2-201ENST00000439258 465 ntBASIC3.56□□□□□ -1.84
CDH11P55287 MTND5P14-201ENST00000441481 1267 ntBASIC3.56□□□□□ -1.84
CDH11P55287 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH11P55287 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH11P55287 MTCO1P27-201ENST00000448269 226 ntBASIC3.56□□□□□ -1.84
CDH11P55287 USP9YP32-201ENST00000452432 430 ntBASIC3.56□□□□□ -1.84
CDH11P55287 MTCO3P20-201ENST00000454926 688 ntBASIC3.56□□□□□ -1.84
CDH11P55287 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH11P55287 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH11P55287 PLGLA-201ENST00000465668 449 ntBASIC3.56□□□□□ -1.84
CDH11P55287 OR2A20P-203ENST00000498397 1268 ntBASIC3.56□□□□□ -1.84
CDH11P55287 AC010460.1-201ENST00000507087 466 ntBASIC3.56□□□□□ -1.84
CDH11P55287 FTH1P21-201ENST00000512179 511 ntBASIC3.56□□□□□ -1.84
CDH11P55287 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH11P55287 AC108064.1-201ENST00000513791 460 ntBASIC3.56□□□□□ -1.84
CDH11P55287 RNA5SP216-201ENST00000516111 123 ntBASIC3.56□□□□□ -1.84
CDH11P55287 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH11P55287 AC106038.2-201ENST00000520706 568 ntBASIC3.56□□□□□ -1.84
CDH11P55287 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH11P55287 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.56□□□□□ -1.84
CDH11P55287 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH11P55287 ROCK1P1-201ENST00000573767 549 ntBASIC3.56□□□□□ -1.84
CDH11P55287 AC053481.4-201ENST00000583164 216 ntBASIC3.56□□□□□ -1.84
CDH11P55287 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.56□□□□□ -1.84
CDH11P55287 AL606490.9-201ENST00000603331 271 ntBASIC3.56□□□□□ -1.84
CDH11P55287 AC004987.4-201ENST00000603383 338 ntBASIC3.56□□□□□ -1.84
CDH11P55287 OR2AS2P-201ENST00000606902 342 ntBASIC3.56□□□□□ -1.84
CDH11P55287 AC080013.4-201ENST00000607624 649 ntBASIC3.56□□□□□ -1.84
CDH11P55287 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH11P55287 AL513477.2-201ENST00000607858 568 ntBASIC3.56□□□□□ -1.84
CDH11P55287 AC245008.1-201ENST00000608123 476 ntBASIC3.56□□□□□ -1.84
CDH11P55287 MIR7844-201ENST00000616161 122 ntBASIC3.56□□□□□ -1.84
CDH11P55287 AC091931.1-201ENST00000623488 728 ntBASIC3.56□□□□□ -1.84
CDH11P55287 AL356596.1-201ENST00000624230 379 ntBASIC3.56□□□□□ -1.84
CDH11P55287 AC034229.5-201ENST00000624258 185 ntBASIC3.56□□□□□ -1.84
CDH11P55287 AC004777.1-201ENST00000624317 287 ntBASIC3.56□□□□□ -1.84
CDH11P55287 AC244205.2-202ENST00000635781 342 ntBASIC3.56□□□□□ -1.84
CDH11P55287 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CDH11P55287 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH11P55287 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH11P55287 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CDH11P55287 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CDH11P55287 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH11P55287 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms