Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF144AP50876 MRPS21P8-201ENST00000569196 235 ntBASIC5.67□□□□□ -1.5
RNF144AP50876 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF144AP50876 RNF138P2-201ENST00000603490 592 ntBASIC5.67□□□□□ -1.5
RNF144AP50876 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.67□□□□□ -1.5
RNF144AP50876 AC006023.2-201ENST00000609916 167 ntBASIC5.67□□□□□ -1.5
RNF144AP50876 uc_338.26-201ENST00000612659 160 ntBASIC5.67□□□□□ -1.5
RNF144AP50876 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF144AP50876 AC010325.3-201ENST00000641084 394 ntBASIC5.67□□□□□ -1.5
RNF144AP50876 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF144AP50876 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF144AP50876 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.67□□□□□ -1.5
RNF144AP50876 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RNF144AP50876 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RNF144AP50876 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RNF144AP50876 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF144AP50876 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF144AP50876 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
RNF144AP50876 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RNF144AP50876 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RNF144AP50876 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF144AP50876 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.67□□□□□ -1.5
RNF144AP50876 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF144AP50876 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF144AP50876 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF144AP50876 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
RNF144AP50876 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
RNF144AP50876 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RNF144AP50876 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF144AP50876 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF144AP50876 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF144AP50876 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF144AP50876 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
RNF144AP50876 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RNF144AP50876 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF144AP50876 MIR188-201ENST00000385034 86 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 SNORD58.1-201ENST00000391313 66 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 RPSAP65-201ENST00000429660 595 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.66□□□□□ -1.5
RNF144AP50876 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF144AP50876 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 Y_RNA.644-201ENST00000459006 113 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 snoU13.29-201ENST00000459370 104 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 AC008481.1-201ENST00000463278 396 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 AC104339.1-201ENST00000465478 348 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.66□□□□□ -1.5
RNF144AP50876 AC098818.1-201ENST00000478593 252 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 AL035690.1-201ENST00000490892 383 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 RPS27P20-201ENST00000492051 246 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 ACA59.1-201ENST00000515966 143 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 RNU6-27P-201ENST00000516146 107 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 Y_RNA.674-201ENST00000516362 113 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 RN7SKP70-201ENST00000516655 271 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 AC034114.1-201ENST00000520293 285 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF144AP50876 OR10G5P-201ENST00000532733 358 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 AP002770.2-201ENST00000543613 532 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF144AP50876 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF144AP50876 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF144AP50876 AC006363.1-201ENST00000603806 463 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 AC008555.7-201ENST00000605008 583 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 BX284668.6-201ENST00000606899 438 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 MIR6721-201ENST00000617181 87 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 AC073488.6-201ENST00000632293 754 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 AL450472.1-202ENST00000637286 180 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 AC073869.10-201ENST00000642016 354 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF144AP50876 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.66□□□□□ -1.5
RNF144AP50876 AL031119.1-201ENST00000404707 1879 ntBASIC5.66□□□□□ -1.5
RNF144AP50876 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF144AP50876 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF144AP50876 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RNF144AP50876 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF144AP50876 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF144AP50876 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.65□□□□□ -1.5
RNF144AP50876 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RNF144AP50876 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.65□□□□□ -1.5
RNF144AP50876 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF144AP50876 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RNF144AP50876 RN7SKP250-201ENST00000363924 321 ntBASIC5.65□□□□□ -1.5
RNF144AP50876 Y_RNA.269-201ENST00000364685 89 ntBASIC5.65□□□□□ -1.5
RNF144AP50876 Y_RNA.277-201ENST00000364754 102 ntBASIC5.65□□□□□ -1.5
RNF144AP50876 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RNF144AP50876 U3.29-201ENST00000391296 212 ntBASIC5.65□□□□□ -1.5
RNF144AP50876 AL139156.1-201ENST00000412785 841 ntBASIC5.65□□□□□ -1.5
RNF144AP50876 DNAJC19P7-201ENST00000428811 344 ntBASIC5.65□□□□□ -1.5
RNF144AP50876 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.65□□□□□ -1.5
RNF144AP50876 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF144AP50876 RN7SL836P-201ENST00000476140 296 ntBASIC5.65□□□□□ -1.5
RNF144AP50876 AC113367.2-201ENST00000505749 160 ntBASIC5.65□□□□□ -1.5
RNF144AP50876 AC069113.1-201ENST00000517763 267 ntBASIC5.65□□□□□ -1.5
RNF144AP50876 AC036111.2-201ENST00000533247 901 ntBASIC5.65□□□□□ -1.5
RNF144AP50876 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.65□□□□□ -1.5
RNF144AP50876 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF144AP50876 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF144AP50876 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF144AP50876 RNU6-85P-201ENST00000605989 107 ntBASIC5.65□□□□□ -1.5
RNF144AP50876 AL591516.1-201ENST00000611326 274 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms