Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.32□□□□□ -1.88
CASP4P49662 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CASP4P49662 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CASP4P49662 RPL23AP57-201ENST00000332361 466 ntBASIC3.31□□□□□ -1.88
CASP4P49662 RNU6-353P-201ENST00000364266 108 ntBASIC3.31□□□□□ -1.88
CASP4P49662 RNU6-115P-201ENST00000364310 107 ntBASIC3.31□□□□□ -1.88
CASP4P49662 RPL7P8-201ENST00000411964 730 ntBASIC3.31□□□□□ -1.88
CASP4P49662 TAF13P2-201ENST00000416876 286 ntBASIC3.31□□□□□ -1.88
CASP4P49662 RPL21P66-201ENST00000426566 466 ntBASIC3.31□□□□□ -1.88
CASP4P49662 AL096829.2-201ENST00000446582 742 ntBASIC3.31□□□□□ -1.88
CASP4P49662 AL671855.1-201ENST00000446875 1203 ntBASIC3.31□□□□□ -1.88
CASP4P49662 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.31□□□□□ -1.88
CASP4P49662 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.31□□□□□ -1.88
CASP4P49662 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.31□□□□□ -1.88
CASP4P49662 snoU13.22-201ENST00000459428 104 ntBASIC3.31□□□□□ -1.88
CASP4P49662 RPL23AP44-201ENST00000482216 473 ntBASIC3.31□□□□□ -1.88
CASP4P49662 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.31□□□□□ -1.88
CASP4P49662 RPL23AP55-201ENST00000498163 452 ntBASIC3.31□□□□□ -1.88
CASP4P49662 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.31□□□□□ -1.88
CASP4P49662 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CASP4P49662 AC048346.1-201ENST00000510247 144 ntBASIC3.31□□□□□ -1.88
CASP4P49662 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.31□□□□□ -1.88
CASP4P49662 RN7SKP244-201ENST00000516513 307 ntBASIC3.31□□□□□ -1.88
CASP4P49662 RN7SKP57-201ENST00000517248 293 ntBASIC3.31□□□□□ -1.88
CASP4P49662 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.31□□□□□ -1.88
CASP4P49662 ARL2BPP5-201ENST00000523141 481 ntBASIC3.31□□□□□ -1.88
CASP4P49662 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
CASP4P49662 AC006518.2-201ENST00000542513 940 ntBASIC3.31□□□□□ -1.88
CASP4P49662 SYF2P1-201ENST00000550658 413 ntBASIC3.31□□□□□ -1.88
CASP4P49662 AL163153.1-201ENST00000554223 283 ntBASIC3.31□□□□□ -1.88
CASP4P49662 AC037471.2-201ENST00000564941 598 ntBASIC3.31□□□□□ -1.88
CASP4P49662 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.31□□□□□ -1.88
CASP4P49662 MIR3690-201ENST00000580266 75 ntBASIC3.31□□□□□ -1.88
CASP4P49662 VN1R74P-201ENST00000613259 503 ntBASIC3.31□□□□□ -1.88
CASP4P49662 MIR8057-201ENST00000620957 69 ntBASIC3.31□□□□□ -1.88
CASP4P49662 AC006963.1-201ENST00000624003 1052 ntBASIC3.31□□□□□ -1.88
CASP4P49662 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.31□□□□□ -1.88
CASP4P49662 BX649567.1-201ENST00000642071 1134 ntBASIC3.31□□□□□ -1.88
CASP4P49662 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.31□□□□□ -1.88
CASP4P49662 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CASP4P49662 DBF4P1-201ENST00000412976 1892 ntBASIC3.3□□□□□ -1.88
CASP4P49662 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.3□□□□□ -1.88
CASP4P49662 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.3□□□□□ -1.88
CASP4P49662 MTND4P34-201ENST00000572715 1371 ntBASIC3.3□□□□□ -1.88
CASP4P49662 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.3□□□□□ -1.88
CASP4P49662 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CASP4P49662 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CASP4P49662 MIR22-201ENST00000362190 85 ntBASIC3.3□□□□□ -1.88
CASP4P49662 Y_RNA.333-201ENST00000365274 102 ntBASIC3.3□□□□□ -1.88
CASP4P49662 OR1L1-202ENST00000373686 1083 ntBASIC3.3□□□□□ -1.88
CASP4P49662 RPL7P25-201ENST00000404151 721 ntBASIC3.3□□□□□ -1.88
CASP4P49662 AL583834.1-201ENST00000406943 343 ntBASIC3.3□□□□□ -1.88
CASP4P49662 AL023807.1-201ENST00000407932 359 ntBASIC3.3□□□□□ -1.88
CASP4P49662 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.3□□□□□ -1.88
CASP4P49662 RN7SKP220-201ENST00000410611 288 ntBASIC3.3□□□□□ -1.88
CASP4P49662 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.3□□□□□ -1.88
CASP4P49662 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.3□□□□□ -1.88
CASP4P49662 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.3□□□□□ -1.88
CASP4P49662 HSFY1P1-201ENST00000423928 1178 ntBASIC3.3□□□□□ -1.88
CASP4P49662 TRIAP1P1-201ENST00000427062 225 ntBASIC3.3□□□□□ -1.88
CASP4P49662 OR2AS1P-201ENST00000427827 319 ntBASIC3.3□□□□□ -1.88
CASP4P49662 AC006946.1-201ENST00000429106 328 ntBASIC3.3□□□□□ -1.88
CASP4P49662 VDAC1P3-201ENST00000434069 851 ntBASIC3.3□□□□□ -1.88
CASP4P49662 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.3□□□□□ -1.88
CASP4P49662 RPL37P4-201ENST00000448908 268 ntBASIC3.3□□□□□ -1.88
CASP4P49662 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.3□□□□□ -1.88
CASP4P49662 UQCRHP3-201ENST00000451503 251 ntBASIC3.3□□□□□ -1.88
CASP4P49662 AC104073.1-201ENST00000451988 151 ntBASIC3.3□□□□□ -1.88
CASP4P49662 NDUFA5P7-201ENST00000452914 242 ntBASIC3.3□□□□□ -1.88
CASP4P49662 TRBV26-201ENST00000456572 344 ntBASIC3.3□□□□□ -1.88
CASP4P49662 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
CASP4P49662 AP002884.2-201ENST00000471647 395 ntBASIC3.3□□□□□ -1.88
CASP4P49662 AC012181.1-201ENST00000479895 423 ntBASIC3.3□□□□□ -1.88
CASP4P49662 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.3□□□□□ -1.88
CASP4P49662 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CASP4P49662 AC011352.3-201ENST00000505162 593 ntBASIC3.3□□□□□ -1.88
CASP4P49662 RNU6-1073P-201ENST00000517182 106 ntBASIC3.3□□□□□ -1.88
CASP4P49662 AC109635.4-202ENST00000531666 412 ntBASIC3.3□□□□□ -1.88
CASP4P49662 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.3□□□□□ -1.88
CASP4P49662 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.3□□□□□ -1.88
CASP4P49662 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.3□□□□□ -1.88
CASP4P49662 MIR4474-201ENST00000579189 78 ntBASIC3.3□□□□□ -1.88
CASP4P49662 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.3□□□□□ -1.88
CASP4P49662 MIR5195-201ENST00000583555 115 ntBASIC3.3□□□□□ -1.88
CASP4P49662 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.3□□□□□ -1.88
CASP4P49662 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.3□□□□□ -1.88
CASP4P49662 AC103881.1-201ENST00000603476 538 ntBASIC3.3□□□□□ -1.88
CASP4P49662 RPL21P136-201ENST00000605378 396 ntBASIC3.3□□□□□ -1.88
CASP4P49662 AC120053.1-201ENST00000607706 736 ntBASIC3.3□□□□□ -1.88
CASP4P49662 AL590282.1-201ENST00000610379 1136 ntBASIC3.3□□□□□ -1.88
CASP4P49662 AC008759.3-201ENST00000613300 508 ntBASIC3.3□□□□□ -1.88
CASP4P49662 AC090116.1-201ENST00000615679 446 ntBASIC3.3□□□□□ -1.88
CASP4P49662 ATP5A1P2-202ENST00000616464 443 ntBASIC3.3□□□□□ -1.88
CASP4P49662 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CASP4P49662 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.3□□□□□ -1.88
CASP4P49662 AC139713.2-210ENST00000641741 992 ntBASIC3.3□□□□□ -1.88
CASP4P49662 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CASP4P49662 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CASP4P49662 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
CASP4P49662 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms