Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RPL7P30-201ENST00000420888 709 ntBASIC3.95□□□□□ -1.78
HADHAP40939 RPL21P66-201ENST00000426566 466 ntBASIC3.95□□□□□ -1.78
HADHAP40939 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.95□□□□□ -1.78
HADHAP40939 AL117339.2-201ENST00000430475 180 ntBASIC3.95□□□□□ -1.78
HADHAP40939 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.95□□□□□ -1.78
HADHAP40939 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.95□□□□□ -1.78
HADHAP40939 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.95□□□□□ -1.78
HADHAP40939 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.95□□□□□ -1.78
HADHAP40939 RPL21P89-201ENST00000444021 467 ntBASIC3.95□□□□□ -1.78
HADHAP40939 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.95□□□□□ -1.78
HADHAP40939 CDC27P1-201ENST00000445384 715 ntBASIC3.95□□□□□ -1.78
HADHAP40939 AL359073.1-201ENST00000448036 403 ntBASIC3.95□□□□□ -1.78
HADHAP40939 AC098824.1-201ENST00000453565 980 ntBASIC3.95□□□□□ -1.78
HADHAP40939 AL109741.2-201ENST00000455561 343 ntBASIC3.95□□□□□ -1.78
HADHAP40939 RN7SL93P-201ENST00000463035 293 ntBASIC3.95□□□□□ -1.78
HADHAP40939 RPS4XP10-201ENST00000465034 731 ntBASIC3.95□□□□□ -1.78
HADHAP40939 AC010285.1-201ENST00000470580 392 ntBASIC3.95□□□□□ -1.78
HADHAP40939 RN7SL132P-201ENST00000478131 296 ntBASIC3.95□□□□□ -1.78
HADHAP40939 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.95□□□□□ -1.78
HADHAP40939 AC093278.1-201ENST00000494700 600 ntBASIC3.95□□□□□ -1.78
HADHAP40939 AC004069.2-201ENST00000505438 1114 ntBASIC3.95□□□□□ -1.78
HADHAP40939 RNU6-150P-201ENST00000516237 95 ntBASIC3.95□□□□□ -1.78
HADHAP40939 RNA5SP179-201ENST00000517284 121 ntBASIC3.95□□□□□ -1.78
HADHAP40939 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.95□□□□□ -1.78
HADHAP40939 UBE2NP1-201ENST00000545592 458 ntBASIC3.95□□□□□ -1.78
HADHAP40939 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.95□□□□□ -1.78
HADHAP40939 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.95□□□□□ -1.78
HADHAP40939 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.95□□□□□ -1.78
HADHAP40939 AC091167.4-201ENST00000605079 184 ntBASIC3.95□□□□□ -1.78
HADHAP40939 AL390208.1-201ENST00000605885 644 ntBASIC3.95□□□□□ -1.78
HADHAP40939 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.95□□□□□ -1.78
HADHAP40939 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.95□□□□□ -1.78
HADHAP40939 AC079228.1-201ENST00000624774 1049 ntBASIC3.95□□□□□ -1.78
HADHAP40939 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HADHAP40939 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HADHAP40939 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
HADHAP40939 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.94□□□□□ -1.78
HADHAP40939 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HADHAP40939 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HADHAP40939 RNU6-952P-201ENST00000391164 108 ntBASIC3.94□□□□□ -1.78
HADHAP40939 RSL24D1P4-201ENST00000400938 484 ntBASIC3.94□□□□□ -1.78
HADHAP40939 AP000567.1-201ENST00000406413 156 ntBASIC3.94□□□□□ -1.78
HADHAP40939 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.94□□□□□ -1.78
HADHAP40939 RNU4-6P-201ENST00000410804 122 ntBASIC3.94□□□□□ -1.78
HADHAP40939 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.94□□□□□ -1.78
HADHAP40939 AL137014.1-201ENST00000420490 1226 ntBASIC3.94□□□□□ -1.78
HADHAP40939 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.94□□□□□ -1.78
HADHAP40939 AL008629.1-201ENST00000438615 184 ntBASIC3.94□□□□□ -1.78
HADHAP40939 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.94□□□□□ -1.78
HADHAP40939 RPL23AP35-201ENST00000451906 501 ntBASIC3.94□□□□□ -1.78
HADHAP40939 Z82190.1-201ENST00000454534 490 ntBASIC3.94□□□□□ -1.78
HADHAP40939 HMGN2P16-201ENST00000456802 261 ntBASIC3.94□□□□□ -1.78
HADHAP40939 MEMO1P3-201ENST00000459811 302 ntBASIC3.94□□□□□ -1.78
HADHAP40939 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.94□□□□□ -1.78
HADHAP40939 AC004263.1-201ENST00000479327 332 ntBASIC3.94□□□□□ -1.78
HADHAP40939 AC021146.5-201ENST00000503544 545 ntBASIC3.94□□□□□ -1.78
HADHAP40939 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.94□□□□□ -1.78
HADHAP40939 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.94□□□□□ -1.78
HADHAP40939 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.94□□□□□ -1.78
HADHAP40939 TXNP6-201ENST00000510190 310 ntBASIC3.94□□□□□ -1.78
HADHAP40939 AC024589.1-201ENST00000512207 263 ntBASIC3.94□□□□□ -1.78
HADHAP40939 AC093677.1-201ENST00000514414 678 ntBASIC3.94□□□□□ -1.78
HADHAP40939 RNU6-1073P-201ENST00000517182 106 ntBASIC3.94□□□□□ -1.78
HADHAP40939 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HADHAP40939 AC023538.1-201ENST00000534576 736 ntBASIC3.94□□□□□ -1.78
HADHAP40939 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.94□□□□□ -1.78
HADHAP40939 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.94□□□□□ -1.78
HADHAP40939 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.94□□□□□ -1.78
HADHAP40939 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.94□□□□□ -1.78
HADHAP40939 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.94□□□□□ -1.78
HADHAP40939 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.94□□□□□ -1.78
HADHAP40939 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.94□□□□□ -1.78
HADHAP40939 AL353997.4-201ENST00000586196 166 ntBASIC3.94□□□□□ -1.78
HADHAP40939 AC020914.6-201ENST00000594327 272 ntBASIC3.94□□□□□ -1.78
HADHAP40939 AC087683.2-201ENST00000611384 326 ntBASIC3.94□□□□□ -1.78
HADHAP40939 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HADHAP40939 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HADHAP40939 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
HADHAP40939 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
HADHAP40939 AL022578.1-201ENST00000439330 1433 ntBASIC3.94□□□□□ -1.78
HADHAP40939 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.94□□□□□ -1.78
HADHAP40939 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HADHAP40939 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
HADHAP40939 AL161781.1-201ENST00000354277 403 ntBASIC3.93□□□□□ -1.78
HADHAP40939 MIR423-201ENST00000362201 94 ntBASIC3.93□□□□□ -1.78
HADHAP40939 RNA5SP97-201ENST00000365006 84 ntBASIC3.93□□□□□ -1.78
HADHAP40939 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HADHAP40939 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.93□□□□□ -1.78
HADHAP40939 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.93□□□□□ -1.78
HADHAP40939 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.93□□□□□ -1.78
HADHAP40939 AC092447.6-201ENST00000414578 210 ntBASIC3.93□□□□□ -1.78
HADHAP40939 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.93□□□□□ -1.78
HADHAP40939 TOMM22P1-201ENST00000418578 312 ntBASIC3.93□□□□□ -1.78
HADHAP40939 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.93□□□□□ -1.78
HADHAP40939 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.93□□□□□ -1.78
HADHAP40939 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HADHAP40939 AL354941.1-201ENST00000438600 464 ntBASIC3.93□□□□□ -1.78
HADHAP40939 SNORA71B-202ENST00000439232 272 ntBASIC3.93□□□□□ -1.78
HADHAP40939 AC122718.1-201ENST00000439448 744 ntBASIC3.93□□□□□ -1.78
HADHAP40939 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms