Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 DEFB109B-201ENST00000382656 264 ntBASIC2.01□□□□□ -2.09
SNCAP37840 SNORA44-201ENST00000384584 132 ntBASIC2.01□□□□□ -2.09
SNCAP37840 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SNCAP37840 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SNCAP37840 AC092447.6-201ENST00000414578 210 ntBASIC2.01□□□□□ -2.09
SNCAP37840 TOMM22P1-201ENST00000418578 312 ntBASIC2.01□□□□□ -2.09
SNCAP37840 FNDC3CP-201ENST00000420795 1155 ntBASIC2.01□□□□□ -2.09
SNCAP37840 MTCO2P17-201ENST00000424336 677 ntBASIC2.01□□□□□ -2.09
SNCAP37840 RPL21P66-201ENST00000426566 466 ntBASIC2.01□□□□□ -2.09
SNCAP37840 AC098826.1-201ENST00000433943 471 ntBASIC2.01□□□□□ -2.09
SNCAP37840 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.01□□□□□ -2.09
SNCAP37840 AC090096.1-201ENST00000489168 390 ntBASIC2.01□□□□□ -2.09
SNCAP37840 CDC42P4-201ENST00000510507 563 ntBASIC2.01□□□□□ -2.09
SNCAP37840 AC112673.1-201ENST00000513168 575 ntBASIC2.01□□□□□ -2.09
SNCAP37840 SNORA31.1-201ENST00000515993 133 ntBASIC2.01□□□□□ -2.09
SNCAP37840 SNORA31.5-201ENST00000516190 133 ntBASIC2.01□□□□□ -2.09
SNCAP37840 AC087808.1-201ENST00000520501 361 ntBASIC2.01□□□□□ -2.09
SNCAP37840 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.01□□□□□ -2.09
SNCAP37840 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.01□□□□□ -2.09
SNCAP37840 ELOCP29-201ENST00000588193 334 ntBASIC2.01□□□□□ -2.09
SNCAP37840 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.01□□□□□ -2.09
SNCAP37840 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SNCAP37840 U4.3-201ENST00000621047 82 ntBASIC2.01□□□□□ -2.09
SNCAP37840 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SNCAP37840 AC092608.2-201ENST00000624427 218 ntBASIC2.01□□□□□ -2.09
SNCAP37840 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2□□□□□ -2.09
SNCAP37840 AL365361.1-201ENST00000566942 3481 ntBASIC2□□□□□ -2.09
SNCAP37840 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
SNCAP37840 RNU6-859P-201ENST00000362728 107 ntBASIC2□□□□□ -2.09
SNCAP37840 SNORD46.1-201ENST00000364139 104 ntBASIC2□□□□□ -2.09
SNCAP37840 SNORD114-30-201ENST00000364448 72 ntBASIC2□□□□□ -2.09
SNCAP37840 AL356057.3-201ENST00000402607 340 ntBASIC2□□□□□ -2.09
SNCAP37840 AL590290.1-201ENST00000405336 380 ntBASIC2□□□□□ -2.09
SNCAP37840 MTND1P23-201ENST00000416931 372 ntBASIC2□□□□□ -2.09
SNCAP37840 MTATP6P4-201ENST00000427725 675 ntBASIC2□□□□□ -2.09
SNCAP37840 WARS2P1-201ENST00000429678 537 ntBASIC2□□□□□ -2.09
SNCAP37840 AC023347.2-201ENST00000433994 462 ntBASIC2□□□□□ -2.09
SNCAP37840 AC105272.1-201ENST00000438604 198 ntBASIC2□□□□□ -2.09
SNCAP37840 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2□□□□□ -2.09
SNCAP37840 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2□□□□□ -2.09
SNCAP37840 RPL23AP15-201ENST00000450202 459 ntBASIC2□□□□□ -2.09
SNCAP37840 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2□□□□□ -2.09
SNCAP37840 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2□□□□□ -2.09
SNCAP37840 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2□□□□□ -2.09
SNCAP37840 AC008565.1-201ENST00000509046 885 ntBASIC2□□□□□ -2.09
SNCAP37840 AC008716.1-201ENST00000511084 513 ntBASIC2□□□□□ -2.09
SNCAP37840 IGHVII-62-1-201ENST00000519283 235 ntBASIC2□□□□□ -2.09
SNCAP37840 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2□□□□□ -2.09
SNCAP37840 AL391156.1-201ENST00000554965 554 ntBASIC2□□□□□ -2.09
SNCAP37840 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2□□□□□ -2.09
SNCAP37840 AL049874.4-201ENST00000557593 255 ntBASIC2□□□□□ -2.09
SNCAP37840 AC007619.2-201ENST00000605743 379 ntBASIC2□□□□□ -2.09
SNCAP37840 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2□□□□□ -2.09
SNCAP37840 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2□□□□□ -2.09
SNCAP37840 AL137790.1-201ENST00000634283 177 ntBASIC2□□□□□ -2.09
SNCAP37840 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2□□□□□ -2.09
SNCAP37840 ZNF658B-202ENST00000615961 3375 ntBASIC2□□□□□ -2.09
SNCAP37840 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2□□□□□ -2.09
SNCAP37840 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SNCAP37840 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SNCAP37840 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SNCAP37840 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SNCAP37840 RNU6-799P-201ENST00000363567 107 ntBASIC1.99□□□□□ -2.09
SNCAP37840 RNU1-51P-201ENST00000365345 176 ntBASIC1.99□□□□□ -2.09
SNCAP37840 SNORA41-201ENST00000384675 132 ntBASIC1.99□□□□□ -2.09
SNCAP37840 AL360182.1-201ENST00000397433 468 ntBASIC1.99□□□□□ -2.09
SNCAP37840 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.99□□□□□ -2.09
SNCAP37840 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.99□□□□□ -2.09
SNCAP37840 AC087879.1-201ENST00000474343 374 ntBASIC1.99□□□□□ -2.09
SNCAP37840 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.99□□□□□ -2.09
SNCAP37840 AL024509.2-201ENST00000493462 493 ntBASIC1.99□□□□□ -2.09
SNCAP37840 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.99□□□□□ -2.09
SNCAP37840 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SNCAP37840 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.99□□□□□ -2.09
SNCAP37840 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.99□□□□□ -2.09
SNCAP37840 AC005351.1-201ENST00000511152 786 ntBASIC1.99□□□□□ -2.09
SNCAP37840 RNU6-1073P-201ENST00000517182 106 ntBASIC1.99□□□□□ -2.09
SNCAP37840 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.99□□□□□ -2.09
SNCAP37840 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC1.99□□□□□ -2.09
SNCAP37840 COX6CP8-201ENST00000522620 226 ntBASIC1.99□□□□□ -2.09
SNCAP37840 AC113192.3-201ENST00000529152 742 ntBASIC1.99□□□□□ -2.09
SNCAP37840 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SNCAP37840 AC243972.3-201ENST00000539655 198 ntBASIC1.99□□□□□ -2.09
SNCAP37840 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.99□□□□□ -2.09
SNCAP37840 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.99□□□□□ -2.09
SNCAP37840 AC121758.2-201ENST00000553271 193 ntBASIC1.99□□□□□ -2.09
SNCAP37840 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.99□□□□□ -2.09
SNCAP37840 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.99□□□□□ -2.09
SNCAP37840 AC020895.1-201ENST00000595362 272 ntBASIC1.99□□□□□ -2.09
SNCAP37840 AL451007.1-201ENST00000595491 289 ntBASIC1.99□□□□□ -2.09
SNCAP37840 AL442067.2-201ENST00000614033 363 ntBASIC1.99□□□□□ -2.09
SNCAP37840 AL110115.1-201ENST00000614396 364 ntBASIC1.99□□□□□ -2.09
SNCAP37840 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.99□□□□□ -2.09
SNCAP37840 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC1.99□□□□□ -2.09
SNCAP37840 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SNCAP37840 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.98□□□□□ -2.09
SNCAP37840 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SNCAP37840 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SNCAP37840 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SNCAP37840 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms