Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC6A4P31645 AL136126.1-201ENST00000473603 402 ntBASIC4.53□□□□□ -1.68
SLC6A4P31645 RBM43P1-201ENST00000476891 1081 ntBASIC4.53□□□□□ -1.68
SLC6A4P31645 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC6A4P31645 RNA5SP464-201ENST00000516251 108 ntBASIC4.53□□□□□ -1.68
SLC6A4P31645 RN7SKP21-201ENST00000516503 220 ntBASIC4.53□□□□□ -1.68
SLC6A4P31645 HMGB1P19-201ENST00000517578 577 ntBASIC4.53□□□□□ -1.68
SLC6A4P31645 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.53□□□□□ -1.68
SLC6A4P31645 AC022616.6-201ENST00000520479 119 ntBASIC4.53□□□□□ -1.68
SLC6A4P31645 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC6A4P31645 AC022790.1-201ENST00000522872 204 ntBASIC4.53□□□□□ -1.68
SLC6A4P31645 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC6A4P31645 AC023575.1-201ENST00000580510 358 ntBASIC4.53□□□□□ -1.68
SLC6A4P31645 HMGB2P1-201ENST00000591146 634 ntBASIC4.53□□□□□ -1.68
SLC6A4P31645 AC007566.2-201ENST00000603642 413 ntBASIC4.53□□□□□ -1.68
SLC6A4P31645 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC6A4P31645 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SLC6A4P31645 uc_338.13-201ENST00000618243 179 ntBASIC4.53□□□□□ -1.68
SLC6A4P31645 AC005086.4-201ENST00000623065 213 ntBASIC4.53□□□□□ -1.68
SLC6A4P31645 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC6A4P31645 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC6A4P31645 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SLC6A4P31645 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A4P31645 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A4P31645 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A4P31645 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC6A4P31645 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A4P31645 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A4P31645 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC6A4P31645 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SLC6A4P31645 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A4P31645 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SLC6A4P31645 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A4P31645 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SLC6A4P31645 Y_RNA.126-201ENST00000363382 111 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 RNY4P14-201ENST00000363656 96 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 RNU5E-4P-201ENST00000364931 120 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.52□□□□□ -1.69
SLC6A4P31645 Y_RNA.402-201ENST00000383972 102 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 AC097374.1-203ENST00000400783 485 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 BTBD10P2-201ENST00000404779 676 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 MIR1193-201ENST00000408109 78 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 SNORA11F-201ENST00000408237 128 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 AC011933.1-201ENST00000413334 321 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 RPL30P16-201ENST00000419341 429 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 MTCYBP24-201ENST00000420387 1106 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 ISCA1P6-201ENST00000427740 390 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 AC004975.1-201ENST00000428733 208 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 AC073464.1-201ENST00000429823 534 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC6A4P31645 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC6A4P31645 AC116533.1-201ENST00000459748 321 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC6A4P31645 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC6A4P31645 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC6A4P31645 RPL23AP41-201ENST00000484754 458 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC6A4P31645 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.52□□□□□ -1.69
SLC6A4P31645 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC6A4P31645 AC093824.1-201ENST00000508796 343 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 PGBD4P4-201ENST00000509673 613 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC6A4P31645 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC6A4P31645 OR5BC1P-201ENST00000529327 739 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A4P31645 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.52□□□□□ -1.69
SLC6A4P31645 SETP2-201ENST00000553886 926 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC6A4P31645 AL845331.3-202ENST00000562856 261 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 MIR1254-2-201ENST00000579553 63 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC6A4P31645 AL354984.3-201ENST00000604803 325 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 AC121334.2-201ENST00000605387 271 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC6A4P31645 AC004067.1-201ENST00000608733 700 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 AC092954.2-201ENST00000609103 430 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 BX664608.1-201ENST00000610519 487 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 AC009159.1-201ENST00000618386 642 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC6A4P31645 AL596245.1-201ENST00000618994 362 ntBASIC4.52□□□□□ -1.69
SLC6A4P31645 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A4P31645 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
SLC6A4P31645 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A4P31645 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC6A4P31645 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
SLC6A4P31645 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC6A4P31645 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC6A4P31645 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC6A4P31645 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC6A4P31645 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC6A4P31645 AC092435.4-201ENST00000623012 4159 ntBASIC4.51□□□□□ -1.69
SLC6A4P31645 RNU1-132P-201ENST00000364300 164 ntBASIC4.51□□□□□ -1.69
SLC6A4P31645 Y_RNA.256-201ENST00000364594 104 ntBASIC4.51□□□□□ -1.69
SLC6A4P31645 Y_RNA.453-201ENST00000384223 109 ntBASIC4.51□□□□□ -1.69
SLC6A4P31645 AL359704.1-201ENST00000411586 781 ntBASIC4.51□□□□□ -1.69
SLC6A4P31645 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC6A4P31645 RPS15AP40-201ENST00000419621 391 ntBASIC4.51□□□□□ -1.69
SLC6A4P31645 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC6A4P31645 USP9YP36-201ENST00000424581 829 ntBASIC4.51□□□□□ -1.69
SLC6A4P31645 AL589872.1-201ENST00000426602 288 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms