Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC005034.5-201ENST00000604219 466 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 AC133644.2-201ENST00000608142 540 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 AC025574.2-201ENST00000615621 514 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 AC126177.8-201ENST00000618339 1015 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC12P31275 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC12P31275 AC011493.1-201ENST00000596753 1632 ntBASIC4.86□□□□□ -1.63
HOXC12P31275 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXC12P31275 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
HOXC12P31275 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC12P31275 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC12P31275 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC12P31275 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HOXC12P31275 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC12P31275 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC12P31275 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXC12P31275 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC12P31275 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC12P31275 RNU6-188P-201ENST00000364207 107 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC12P31275 SNORA56-201ENST00000383966 129 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 RNU6-38P-201ENST00000384085 107 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 MIR514A2-201ENST00000385131 88 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 MIR514A3-201ENST00000385132 88 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 UBE2FP1-201ENST00000416536 447 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC12P31275 RPL23AP43-201ENST00000446445 471 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 AC073850.1-201ENST00000449243 255 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 AC007967.1-201ENST00000455422 1159 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 PPP1R2P5-201ENST00000457256 603 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC12P31275 RNU6-333P-201ENST00000459117 107 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 SNORD97-201ENST00000459187 142 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC12P31275 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC12P31275 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC12P31275 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC12P31275 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC12P31275 AC103783.1-201ENST00000520506 373 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC12P31275 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXC12P31275 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC12P31275 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.85□□□□□ -1.63
HOXC12P31275 AC026464.5-201ENST00000562497 722 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXC12P31275 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC12P31275 MIR4703-201ENST00000577728 79 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 MIR4646-201ENST00000580775 63 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 AC005498.1-201ENST00000592125 465 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 AC025857.2-201ENST00000602711 238 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 AC007390.2-201ENST00000606229 3803 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 AC104237.2-201ENST00000612456 443 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 AL118522.2-201ENST00000616045 615 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 LINC00901.1-201ENST00000617252 152 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 AL023881.1-201ENST00000621088 301 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 AL160413.1-201ENST00000622780 310 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 AC074101.1-201ENST00000637861 241 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC12P31275 MTND4P14-201ENST00000435799 1354 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 AP004289.2-201ENST00000444413 1457 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 TAB3P1-202ENST00000452645 1634 ntBASIC4.85□□□□□ -1.63
HOXC12P31275 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC12P31275 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC12P31275 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
HOXC12P31275 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXC12P31275 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC12P31275 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC12P31275 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HOXC12P31275 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
HOXC12P31275 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC12P31275 ZNF33CP-201ENST00000432492 2030 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC12P31275 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXC12P31275 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HOXC12P31275 LARP1BP1-201ENST00000506036 1359 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC12P31275 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC12P31275 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC12P31275 FRG1CP-201ENST00000358464 769 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 SNORA63-201ENST00000363450 132 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 SNORA70E-201ENST00000384492 135 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 AL583835.1-201ENST00000399570 407 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 AL109755.1-201ENST00000401791 649 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 MIR1302-11-201ENST00000408051 138 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 MIR1302-9-201ENST00000408365 138 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 MIR1302-10-201ENST00000408734 138 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 RNA5SP345-201ENST00000410646 108 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 OR6C66P-201ENST00000414917 930 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 NCOR1P3-201ENST00000420479 303 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXC12P31275 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXC12P31275 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 MRPL48P1-201ENST00000445390 636 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 PPIAP3-201ENST00000450588 505 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 AL118520.1-201ENST00000450770 291 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 AL162395.1-201ENST00000457882 422 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 SNORD125-201ENST00000459538 96 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 RN7SL189P-201ENST00000468631 289 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms