Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC026412.2-201ENST00000512270 1075 ntBASIC4.22□□□□□ -1.73
TM4SF1P30408 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.22□□□□□ -1.73
TM4SF1P30408 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.22□□□□□ -1.73
TM4SF1P30408 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.22□□□□□ -1.73
TM4SF1P30408 RNA5SP154-201ENST00000516193 111 ntBASIC4.22□□□□□ -1.73
TM4SF1P30408 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.22□□□□□ -1.73
TM4SF1P30408 AP001636.2-201ENST00000525517 696 ntBASIC4.22□□□□□ -1.73
TM4SF1P30408 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.22□□□□□ -1.73
TM4SF1P30408 AC026333.2-201ENST00000542164 106 ntBASIC4.22□□□□□ -1.73
TM4SF1P30408 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.22□□□□□ -1.73
TM4SF1P30408 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.22□□□□□ -1.73
TM4SF1P30408 AC023050.2-201ENST00000544968 387 ntBASIC4.22□□□□□ -1.73
TM4SF1P30408 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.22□□□□□ -1.73
TM4SF1P30408 AL389895.1-201ENST00000554127 252 ntBASIC4.22□□□□□ -1.73
TM4SF1P30408 AC005476.1-201ENST00000554427 397 ntBASIC4.22□□□□□ -1.73
TM4SF1P30408 NBEAP1-201ENST00000554452 979 ntBASIC4.22□□□□□ -1.73
TM4SF1P30408 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.22□□□□□ -1.73
TM4SF1P30408 AC107954.1-201ENST00000565906 727 ntBASIC4.22□□□□□ -1.73
TM4SF1P30408 AC234772.3-201ENST00000602277 528 ntBASIC4.22□□□□□ -1.73
TM4SF1P30408 AL353600.1-201ENST00000608148 251 ntBASIC4.22□□□□□ -1.73
TM4SF1P30408 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TM4SF1P30408 AC073968.1-201ENST00000618594 637 ntBASIC4.22□□□□□ -1.73
TM4SF1P30408 CYP3A51P-201ENST00000633513 256 ntBASIC4.22□□□□□ -1.73
TM4SF1P30408 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
TM4SF1P30408 SCN1A-220ENST00000641603 12506 ntBASIC4.22□□□□□ -1.73
TM4SF1P30408 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TM4SF1P30408 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.22□□□□□ -1.73
TM4SF1P30408 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.22□□□□□ -1.73
TM4SF1P30408 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
TM4SF1P30408 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TM4SF1P30408 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TM4SF1P30408 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TM4SF1P30408 RNA5SP197-201ENST00000363357 119 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 Y_RNA.311-201ENST00000365068 96 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 RNU6-339P-201ENST00000384310 107 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 Y_RNA.493-201ENST00000384422 102 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 MIR513B-201ENST00000385136 84 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 AC007899.1-201ENST00000412776 775 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 TIMM9P2-201ENST00000419324 266 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 AL353705.1-201ENST00000433468 480 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 ATP5F1P1-201ENST00000433775 569 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 RPL23AP74-201ENST00000437246 471 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 AC107083.1-201ENST00000439643 279 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 MTND2P20-201ENST00000440805 661 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.21□□□□□ -1.74
TM4SF1P30408 HMGB3P30-201ENST00000457863 606 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 AC087312.1-201ENST00000471411 480 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 NCOR1P1-202ENST00000486162 291 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 RPS26P15-201ENST00000488067 348 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 OR5H5P-201ENST00000503164 928 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 AC079395.1-201ENST00000510981 262 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 FABP5P12-201ENST00000515543 389 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 RN7SKP31-201ENST00000516354 278 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.21□□□□□ -1.74
TM4SF1P30408 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.21□□□□□ -1.74
TM4SF1P30408 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.21□□□□□ -1.74
TM4SF1P30408 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.21□□□□□ -1.74
TM4SF1P30408 AC034105.3-201ENST00000565294 442 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.21□□□□□ -1.74
TM4SF1P30408 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.21□□□□□ -1.74
TM4SF1P30408 AC090616.5-202ENST00000582111 297 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.21□□□□□ -1.74
TM4SF1P30408 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.21□□□□□ -1.74
TM4SF1P30408 DUXAP3-201ENST00000603616 594 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 AL162713.1-201ENST00000604480 262 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 AC073657.2-201ENST00000605661 303 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 AC026790.2-201ENST00000606282 430 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 AC093732.2-201ENST00000607950 274 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.21□□□□□ -1.74
TM4SF1P30408 RNVU1-4-201ENST00000612985 164 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 AC006963.1-201ENST00000624003 1052 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.21□□□□□ -1.74
TM4SF1P30408 AL390862.1-201ENST00000635467 1469 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.21□□□□□ -1.74
TM4SF1P30408 AL359893.1-201ENST00000447628 1580 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TM4SF1P30408 AL133412.1-201ENST00000380194 2992 ntBASIC4.21□□□□□ -1.74
TM4SF1P30408 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TM4SF1P30408 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TM4SF1P30408 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.2□□□□□ -1.74
TM4SF1P30408 AC073073.2-201ENST00000609827 2578 ntBASIC4.2□□□□□ -1.74
TM4SF1P30408 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
TM4SF1P30408 USP8P1-201ENST00000494673 3183 ntBASIC4.2□□□□□ -1.74
TM4SF1P30408 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
TM4SF1P30408 OR5H2-201ENST00000355273 945 ntBASIC4.2□□□□□ -1.74
TM4SF1P30408 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.2□□□□□ -1.74
TM4SF1P30408 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
TM4SF1P30408 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TM4SF1P30408 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.2□□□□□ -1.74
TM4SF1P30408 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.2□□□□□ -1.74
TM4SF1P30408 RNA5SP239-201ENST00000410218 129 ntBASIC4.2□□□□□ -1.74
TM4SF1P30408 ELOCP9-201ENST00000418624 239 ntBASIC4.2□□□□□ -1.74
TM4SF1P30408 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
TM4SF1P30408 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.2□□□□□ -1.74
TM4SF1P30408 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.2□□□□□ -1.74
TM4SF1P30408 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.2□□□□□ -1.74
TM4SF1P30408 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.2□□□□□ -1.74
TM4SF1P30408 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms