Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.52□□□□□ -2.01
COL5A1P20908 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
COL5A1P20908 AC022069.1-201ENST00000582910 658 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 AF129408.1-201ENST00000608767 431 ntBASIC2.52□□□□□ -2.01
COL5A1P20908 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
COL5A1P20908 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.52□□□□□ -2.01
COL5A1P20908 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.52□□□□□ -2.01
COL5A1P20908 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL5A1P20908 AC109315.1-201ENST00000584143 1347 ntBASIC2.51□□□□□ -2.01
COL5A1P20908 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL5A1P20908 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
COL5A1P20908 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.51□□□□□ -2.01
COL5A1P20908 AC012498.1-201ENST00000424037 437 ntBASIC2.51□□□□□ -2.01
COL5A1P20908 ZNF965P-201ENST00000432501 817 ntBASIC2.51□□□□□ -2.01
COL5A1P20908 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC2.51□□□□□ -2.01
COL5A1P20908 IFNWP4-201ENST00000453148 294 ntBASIC2.51□□□□□ -2.01
COL5A1P20908 CABYRP1-201ENST00000465493 1045 ntBASIC2.51□□□□□ -2.01
COL5A1P20908 RPS27AP9-201ENST00000477681 438 ntBASIC2.51□□□□□ -2.01
COL5A1P20908 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.51□□□□□ -2.01
COL5A1P20908 AC025768.1-201ENST00000510057 267 ntBASIC2.51□□□□□ -2.01
COL5A1P20908 TPT1P8-201ENST00000510120 555 ntBASIC2.51□□□□□ -2.01
COL5A1P20908 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.51□□□□□ -2.01
COL5A1P20908 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.51□□□□□ -2.01
COL5A1P20908 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.51□□□□□ -2.01
COL5A1P20908 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.51□□□□□ -2.01
COL5A1P20908 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL5A1P20908 MTND2P13-201ENST00000577438 1039 ntBASIC2.51□□□□□ -2.01
COL5A1P20908 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.51□□□□□ -2.01
COL5A1P20908 MIR3605-201ENST00000583214 100 ntBASIC2.51□□□□□ -2.01
COL5A1P20908 BNIP3P39-201ENST00000601077 554 ntBASIC2.51□□□□□ -2.01
COL5A1P20908 AC135178.6-201ENST00000605314 398 ntBASIC2.51□□□□□ -2.01
COL5A1P20908 AL355816.2-201ENST00000610049 647 ntBASIC2.51□□□□□ -2.01
COL5A1P20908 AC009452.1-201ENST00000640823 606 ntBASIC2.51□□□□□ -2.01
COL5A1P20908 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
COL5A1P20908 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL5A1P20908 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL5A1P20908 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
COL5A1P20908 AC091564.4-201ENST00000533934 2194 ntBASIC2.51□□□□□ -2.01
COL5A1P20908 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.51□□□□□ -2.01
COL5A1P20908 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
COL5A1P20908 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.5□□□□□ -2.01
COL5A1P20908 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL5A1P20908 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL5A1P20908 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.5□□□□□ -2.01
COL5A1P20908 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL5A1P20908 RNU6-650P-201ENST00000365658 111 ntBASIC2.5□□□□□ -2.01
COL5A1P20908 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
COL5A1P20908 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
COL5A1P20908 RNU6-76P-201ENST00000384060 104 ntBASIC2.5□□□□□ -2.01
COL5A1P20908 RNU6-146P-201ENST00000384602 108 ntBASIC2.5□□□□□ -2.01
COL5A1P20908 MIR518C-201ENST00000384822 101 ntBASIC2.5□□□□□ -2.01
COL5A1P20908 MIR27B-201ENST00000385129 97 ntBASIC2.5□□□□□ -2.01
COL5A1P20908 AL357078.2-201ENST00000416486 427 ntBASIC2.5□□□□□ -2.01
COL5A1P20908 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.5□□□□□ -2.01
COL5A1P20908 DPH3P2-201ENST00000422618 250 ntBASIC2.5□□□□□ -2.01
COL5A1P20908 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
COL5A1P20908 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC2.5□□□□□ -2.01
COL5A1P20908 GXYLT1P1-201ENST00000446657 490 ntBASIC2.5□□□□□ -2.01
COL5A1P20908 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.5□□□□□ -2.01
COL5A1P20908 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
COL5A1P20908 GAPDHP39-201ENST00000481866 979 ntBASIC2.5□□□□□ -2.01
COL5A1P20908 AC093663.2-201ENST00000484625 313 ntBASIC2.5□□□□□ -2.01
COL5A1P20908 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.5□□□□□ -2.01
COL5A1P20908 OR5H5P-201ENST00000503164 928 ntBASIC2.5□□□□□ -2.01
COL5A1P20908 NDUFB4P9-201ENST00000511646 388 ntBASIC2.5□□□□□ -2.01
COL5A1P20908 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.5□□□□□ -2.01
COL5A1P20908 AC103710.3-201ENST00000608157 948 ntBASIC2.5□□□□□ -2.01
COL5A1P20908 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.5□□□□□ -2.01
COL5A1P20908 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
COL5A1P20908 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
COL5A1P20908 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.49□□□□□ -2.01
COL5A1P20908 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL5A1P20908 AL512633.1-201ENST00000399931 655 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.49□□□□□ -2.01
COL5A1P20908 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.49□□□□□ -2.01
COL5A1P20908 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC2.49□□□□□ -2.01
COL5A1P20908 AC093151.1-201ENST00000427711 313 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 AL390023.1-201ENST00000428836 262 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 FCF1P1-201ENST00000432690 571 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.49□□□□□ -2.01
COL5A1P20908 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.49□□□□□ -2.01
COL5A1P20908 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.49□□□□□ -2.01
COL5A1P20908 AC080128.1-201ENST00000474389 1917 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.49□□□□□ -2.01
COL5A1P20908 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.49□□□□□ -2.01
COL5A1P20908 YWHAZP1-201ENST00000556286 722 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 AADACP1-206ENST00000561502 1193 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 AC006116.7-201ENST00000590141 756 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 BNIP3P27-201ENST00000599991 412 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 ZNF92P2-201ENST00000600543 1059 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 AC023813.4-201ENST00000607580 580 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 AC069234.5-201ENST00000611056 416 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 AC025016.1-201ENST00000616746 682 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
COL5A1P20908 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL5A1P20908 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
COL5A1P20908 MTND5P27-201ENST00000428871 1720 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 AC009501.3-201ENST00000605001 1352 ntBASIC2.49□□□□□ -2.01
COL5A1P20908 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
COL5A1P20908 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms