Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NFKB1P19838 AC092681.1-201ENST00000297369 291 ntBASIC5.62□□□□□ -1.51
NFKB1P19838 RNA5SP46-201ENST00000362370 120 ntBASIC5.62□□□□□ -1.51
NFKB1P19838 RNU6-960P-201ENST00000364056 120 ntBASIC5.62□□□□□ -1.51
NFKB1P19838 Y_RNA.428-201ENST00000384078 102 ntBASIC5.62□□□□□ -1.51
NFKB1P19838 SNORD56.6-201ENST00000384569 71 ntBASIC5.62□□□□□ -1.51
NFKB1P19838 Y_RNA.552-201ENST00000384665 112 ntBASIC5.62□□□□□ -1.51
NFKB1P19838 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NFKB1P19838 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
NFKB1P19838 RNU2-64P-201ENST00000411315 191 ntBASIC5.62□□□□□ -1.51
NFKB1P19838 RPL30P2-201ENST00000414021 291 ntBASIC5.62□□□□□ -1.51
NFKB1P19838 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.62□□□□□ -1.51
NFKB1P19838 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.62□□□□□ -1.51
NFKB1P19838 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NFKB1P19838 AC022431.1-201ENST00000450941 438 ntBASIC5.62□□□□□ -1.51
NFKB1P19838 RPL36AP13-201ENST00000457490 317 ntBASIC5.62□□□□□ -1.51
NFKB1P19838 DYNLL1P5-201ENST00000467158 270 ntBASIC5.62□□□□□ -1.51
NFKB1P19838 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.62□□□□□ -1.51
NFKB1P19838 RNU6-1143P-201ENST00000516125 104 ntBASIC5.62□□□□□ -1.51
NFKB1P19838 RNU6-1092P-201ENST00000516955 87 ntBASIC5.62□□□□□ -1.51
NFKB1P19838 SNORD116.3-201ENST00000517176 78 ntBASIC5.62□□□□□ -1.51
NFKB1P19838 AP004609.2-201ENST00000532177 190 ntBASIC5.62□□□□□ -1.51
NFKB1P19838 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.62□□□□□ -1.51
NFKB1P19838 AC090115.3-201ENST00000553218 849 ntBASIC5.62□□□□□ -1.51
NFKB1P19838 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC5.62□□□□□ -1.51
NFKB1P19838 RN7SL802P-201ENST00000577858 299 ntBASIC5.62□□□□□ -1.51
NFKB1P19838 AC005191.1-201ENST00000603950 358 ntBASIC5.62□□□□□ -1.51
NFKB1P19838 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.62□□□□□ -1.51
NFKB1P19838 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NFKB1P19838 AC104118.1-201ENST00000607625 1589 ntBASIC5.62□□□□□ -1.51
NFKB1P19838 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NFKB1P19838 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.62□□□□□ -1.51
NFKB1P19838 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.62□□□□□ -1.51
NFKB1P19838 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NFKB1P19838 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
NFKB1P19838 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NFKB1P19838 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NFKB1P19838 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
NFKB1P19838 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.61□□□□□ -1.51
NFKB1P19838 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
NFKB1P19838 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NFKB1P19838 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.61□□□□□ -1.51
NFKB1P19838 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NFKB1P19838 RNU6-1243P-201ENST00000364028 107 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 RNU6-128P-201ENST00000383976 107 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 Y_RNA.447-201ENST00000384184 113 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 Y_RNA.493-201ENST00000384422 102 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.61□□□□□ -1.51
NFKB1P19838 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NFKB1P19838 MIR1282-201ENST00000408865 101 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 RNU6-101P-201ENST00000410323 104 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NFKB1P19838 OR2AT2P-201ENST00000413438 905 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 AL139095.3-201ENST00000419672 1203 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 RPL23AP38-201ENST00000423801 469 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 AL031736.2-201ENST00000426573 787 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 MTND6P12-201ENST00000428247 522 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 ARL5AP4-201ENST00000430731 512 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 AC236972.1-201ENST00000433225 199 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 RPL21P112-201ENST00000434403 463 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.61□□□□□ -1.51
NFKB1P19838 AC005094.1-201ENST00000440420 368 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.61□□□□□ -1.51
NFKB1P19838 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.61□□□□□ -1.51
NFKB1P19838 RPL36AP39-201ENST00000445859 318 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 SNORD97-201ENST00000459187 142 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
NFKB1P19838 AP002812.1-201ENST00000495378 474 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 AC108078.2-201ENST00000510750 236 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 AC021146.3-201ENST00000511911 260 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NFKB1P19838 RNU6-475P-201ENST00000516073 104 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 RNU1-54P-201ENST00000517181 120 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 AC018442.3-201ENST00000523025 183 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 AL133271.1-201ENST00000538229 291 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.61□□□□□ -1.51
NFKB1P19838 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NFKB1P19838 AC092079.1-201ENST00000558620 1985 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.61□□□□□ -1.51
NFKB1P19838 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.61□□□□□ -1.51
NFKB1P19838 AC010547.6-201ENST00000571789 193 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 AP005403.1-201ENST00000579720 229 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 MIR4293-201ENST00000584305 78 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.61□□□□□ -1.51
NFKB1P19838 AC023813.4-201ENST00000607580 580 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.61□□□□□ -1.51
NFKB1P19838 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
NFKB1P19838 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NFKB1P19838 NLRP3P1-201ENST00000622303 1785 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 AC067931.1-201ENST00000624190 671 ntBASIC5.61□□□□□ -1.51
NFKB1P19838 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.61□□□□□ -1.51
NFKB1P19838 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
NFKB1P19838 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NFKB1P19838 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
NFKB1P19838 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NFKB1P19838 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
NFKB1P19838 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.61□□□□□ -1.51
NFKB1P19838 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NFKB1P19838 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.61□□□□□ -1.51
NFKB1P19838 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms