Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL138713.1-201ENST00000624026 2130 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
COL6A2P12110 AC008758.3-201ENST00000507003 1829 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 AC006020.1-201ENST00000420179 1854 ntBASIC4.88□□□□□ -1.63
COL6A2P12110 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.88□□□□□ -1.63
COL6A2P12110 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.88□□□□□ -1.63
COL6A2P12110 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
COL6A2P12110 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.87□□□□□ -1.63
COL6A2P12110 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL6A2P12110 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.87□□□□□ -1.63
COL6A2P12110 AC108467.2-201ENST00000617640 1597 ntBASIC4.87□□□□□ -1.63
COL6A2P12110 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.87□□□□□ -1.63
COL6A2P12110 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
COL6A2P12110 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
COL6A2P12110 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
COL6A2P12110 Y_RNA.255-201ENST00000364581 97 ntBASIC4.87□□□□□ -1.63
COL6A2P12110 SNORD81.2-201ENST00000365153 76 ntBASIC4.87□□□□□ -1.63
COL6A2P12110 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.87□□□□□ -1.63
COL6A2P12110 SNORA66-201ENST00000384792 133 ntBASIC4.87□□□□□ -1.63
COL6A2P12110 ENSAP1-201ENST00000392855 326 ntBASIC4.87□□□□□ -1.63
COL6A2P12110 AL136116.1-201ENST00000403591 381 ntBASIC4.87□□□□□ -1.63
COL6A2P12110 AL592291.1-201ENST00000403830 352 ntBASIC4.87□□□□□ -1.63
COL6A2P12110 RNU2-15P-201ENST00000410692 191 ntBASIC4.87□□□□□ -1.63
COL6A2P12110 RNU2-62P-201ENST00000410868 191 ntBASIC4.87□□□□□ -1.63
COL6A2P12110 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.87□□□□□ -1.63
COL6A2P12110 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.87□□□□□ -1.63
COL6A2P12110 PDCL2P1-201ENST00000419302 352 ntBASIC4.87□□□□□ -1.63
COL6A2P12110 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.87□□□□□ -1.63
COL6A2P12110 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.87□□□□□ -1.63
COL6A2P12110 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.87□□□□□ -1.63
COL6A2P12110 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.87□□□□□ -1.63
COL6A2P12110 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.87□□□□□ -1.63
COL6A2P12110 RNU7-63P-201ENST00000459054 62 ntBASIC4.87□□□□□ -1.63
COL6A2P12110 RPS4XP10-201ENST00000465034 731 ntBASIC4.87□□□□□ -1.63
COL6A2P12110 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
COL6A2P12110 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.87□□□□□ -1.63
COL6A2P12110 OR2AO1P-201ENST00000476497 403 ntBASIC4.87□□□□□ -1.63
COL6A2P12110 RPL38P4-201ENST00000502376 214 ntBASIC4.87□□□□□ -1.63
COL6A2P12110 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.87□□□□□ -1.63
COL6A2P12110 AC024558.1-201ENST00000505008 528 ntBASIC4.87□□□□□ -1.63
COL6A2P12110 COX7A2P2-201ENST00000505291 250 ntBASIC4.87□□□□□ -1.63
COL6A2P12110 SNORD27.1-201ENST00000516319 72 ntBASIC4.87□□□□□ -1.63
COL6A2P12110 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.87□□□□□ -1.63
COL6A2P12110 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.87□□□□□ -1.63
COL6A2P12110 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.87□□□□□ -1.63
COL6A2P12110 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.87□□□□□ -1.63
COL6A2P12110 AC011447.4-201ENST00000587562 111 ntBASIC4.87□□□□□ -1.63
COL6A2P12110 SDR42E1P1-201ENST00000611327 477 ntBASIC4.87□□□□□ -1.63
COL6A2P12110 AC245517.5-201ENST00000611529 162 ntBASIC4.87□□□□□ -1.63
COL6A2P12110 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.87□□□□□ -1.63
COL6A2P12110 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.87□□□□□ -1.63
COL6A2P12110 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL6A2P12110 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
COL6A2P12110 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
COL6A2P12110 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.87□□□□□ -1.63
COL6A2P12110 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL6A2P12110 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL6A2P12110 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.86□□□□□ -1.63
COL6A2P12110 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL6A2P12110 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL6A2P12110 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL6A2P12110 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
COL6A2P12110 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
COL6A2P12110 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
COL6A2P12110 RNU5A-8P-201ENST00000364102 114 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
COL6A2P12110 Y_RNA.548-201ENST00000384656 105 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 MIR19A-201ENST00000384878 82 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 MIR1178-201ENST00000408396 91 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 EEF1A1P40-201ENST00000412883 573 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 MTCO3P12-201ENST00000416718 547 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 AC127526.1-201ENST00000417526 366 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 RPS15AP40-201ENST00000419621 391 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.86□□□□□ -1.63
COL6A2P12110 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.86□□□□□ -1.63
COL6A2P12110 RPL12P34-201ENST00000424532 479 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 MTCO3P46-201ENST00000425787 232 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL6A2P12110 SRIP2-201ENST00000428470 166 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.86□□□□□ -1.63
COL6A2P12110 AL356276.2-201ENST00000435919 558 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 CACYBPP2-201ENST00000453625 678 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 RN7SL244P-201ENST00000493405 297 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 NIPA2P2-201ENST00000496376 1083 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 HMGB1P21-201ENST00000502313 581 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 HSPD1P15-201ENST00000505573 1122 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.86□□□□□ -1.63
COL6A2P12110 COX6B1P5-201ENST00000509843 249 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 FTH1P21-201ENST00000512179 511 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.86□□□□□ -1.63
COL6A2P12110 AC134698.5-201ENST00000519444 336 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.86□□□□□ -1.63
COL6A2P12110 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.86□□□□□ -1.63
COL6A2P12110 OR4P1P-201ENST00000530808 1136 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.86□□□□□ -1.63
COL6A2P12110 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.86□□□□□ -1.63
COL6A2P12110 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.86□□□□□ -1.63
COL6A2P12110 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.86□□□□□ -1.63
COL6A2P12110 GLUD1P4-201ENST00000590914 418 ntBASIC4.86□□□□□ -1.63
COL6A2P12110 SUMO2P15-201ENST00000604285 278 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms