Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC2.08□□□□□ -2.08
CXCL1P09341 MIR5004-201ENST00000579078 107 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 AC007448.1-201ENST00000582714 234 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 ZNF861P-201ENST00000588126 639 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.08□□□□□ -2.08
CXCL1P09341 NUTF2P8-201ENST00000604593 363 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 AC008277.2-201ENST00000605196 797 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
CXCL1P09341 AL360181.4-201ENST00000621752 134 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.08□□□□□ -2.08
CXCL1P09341 AC002064.3-201ENST00000623448 346 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 MIR3651-201ENST00000630427 90 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 MTND4P8-201ENST00000514997 1362 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
CXCL1P09341 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CXCL1P09341 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
CXCL1P09341 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.07□□□□□ -2.08
CXCL1P09341 SGO1P2-201ENST00000429458 1589 ntBASIC2.07□□□□□ -2.08
CXCL1P09341 CUL1P1-201ENST00000509510 2425 ntBASIC2.07□□□□□ -2.08
CXCL1P09341 NACA3P-201ENST00000359690 648 ntBASIC2.07□□□□□ -2.08
CXCL1P09341 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CXCL1P09341 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.07□□□□□ -2.08
CXCL1P09341 AL645937.1-202ENST00000421799 937 ntBASIC2.07□□□□□ -2.08
CXCL1P09341 AC006548.1-201ENST00000427470 102 ntBASIC2.07□□□□□ -2.08
CXCL1P09341 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.07□□□□□ -2.08
CXCL1P09341 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.07□□□□□ -2.08
CXCL1P09341 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CXCL1P09341 CACYBPP2-201ENST00000453625 678 ntBASIC2.07□□□□□ -2.08
CXCL1P09341 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.07□□□□□ -2.08
CXCL1P09341 RPL32P34-201ENST00000486380 400 ntBASIC2.07□□□□□ -2.08
CXCL1P09341 HMGB1P3-201ENST00000502802 616 ntBASIC2.07□□□□□ -2.08
CXCL1P09341 AC083906.5-201ENST00000503722 328 ntBASIC2.07□□□□□ -2.08
CXCL1P09341 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.07□□□□□ -2.08
CXCL1P09341 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.07□□□□□ -2.08
CXCL1P09341 FABP5P6-201ENST00000510588 409 ntBASIC2.07□□□□□ -2.08
CXCL1P09341 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.07□□□□□ -2.08
CXCL1P09341 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.07□□□□□ -2.08
CXCL1P09341 AC093014.1-201ENST00000548926 724 ntBASIC2.07□□□□□ -2.08
CXCL1P09341 AL121603.1-201ENST00000553815 142 ntBASIC2.07□□□□□ -2.08
CXCL1P09341 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.07□□□□□ -2.08
CXCL1P09341 AC087481.2-201ENST00000565492 330 ntBASIC2.07□□□□□ -2.08
CXCL1P09341 MIR4504-201ENST00000577413 92 ntBASIC2.07□□□□□ -2.08
CXCL1P09341 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.07□□□□□ -2.08
CXCL1P09341 AL606834.2-201ENST00000602954 668 ntBASIC2.07□□□□□ -2.08
CXCL1P09341 AL355810.1-201ENST00000614629 552 ntBASIC2.07□□□□□ -2.08
CXCL1P09341 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CXCL1P09341 CR381572.1-201ENST00000625098 102 ntBASIC2.07□□□□□ -2.08
CXCL1P09341 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.07□□□□□ -2.08
CXCL1P09341 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CXCL1P09341 AC005336.3-201ENST00000623833 2679 ntBASIC2.07□□□□□ -2.08
CXCL1P09341 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.07□□□□□ -2.08
CXCL1P09341 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CXCL1P09341 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.06□□□□□ -2.08
CXCL1P09341 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.06□□□□□ -2.08
CXCL1P09341 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.06□□□□□ -2.08
CXCL1P09341 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.06□□□□□ -2.08
CXCL1P09341 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CXCL1P09341 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CXCL1P09341 AL672167.1-206ENST00000356293 943 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 RNU6-374P-201ENST00000364146 108 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 RNA5SP139-201ENST00000364340 117 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 MT-TC-201ENST00000387405 66 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 SNORA48.5-201ENST00000391143 135 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 RAB28P1-201ENST00000411517 641 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 AF274854.1-201ENST00000413236 615 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 AC005326.1-201ENST00000429197 123 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC2.06□□□□□ -2.08
CXCL1P09341 Z85994.2-201ENST00000434327 452 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 AC091862.1-201ENST00000438016 1100 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 LSM1P1-201ENST00000438629 273 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 RPS12P2-201ENST00000439728 269 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.06□□□□□ -2.08
CXCL1P09341 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CXCL1P09341 AL590664.1-201ENST00000448065 339 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.06□□□□□ -2.08
CXCL1P09341 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.06□□□□□ -2.08
CXCL1P09341 NIPA2P5-201ENST00000452282 464 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.06□□□□□ -2.08
CXCL1P09341 SETP11-201ENST00000473027 690 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 AC126182.1-201ENST00000478134 357 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CXCL1P09341 SEM1P1-201ENST00000506694 209 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.06□□□□□ -2.08
CXCL1P09341 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.06□□□□□ -2.08
CXCL1P09341 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CXCL1P09341 AC022616.2-201ENST00000523185 300 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.06□□□□□ -2.08
CXCL1P09341 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.06□□□□□ -2.08
CXCL1P09341 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.06□□□□□ -2.08
CXCL1P09341 GLUD1P4-201ENST00000590914 418 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 BNIP3P11-201ENST00000603878 563 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 AL161637.1-201ENST00000622380 412 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 CYP3A51P-201ENST00000633513 256 ntBASIC2.06□□□□□ -2.08
CXCL1P09341 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CXCL1P09341 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.05□□□□□ -2.08
CXCL1P09341 DSTNP4-201ENST00000399472 474 ntBASIC2.05□□□□□ -2.08
CXCL1P09341 AC025750.1-201ENST00000399891 379 ntBASIC2.05□□□□□ -2.08
CXCL1P09341 MIR1303-201ENST00000408625 86 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms