Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.6□□□□□ -1.83
VIMP08670 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.6□□□□□ -1.83
VIMP08670 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.6□□□□□ -1.83
VIMP08670 AC099677.1-201ENST00000420575 175 ntBASIC3.6□□□□□ -1.83
VIMP08670 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.6□□□□□ -1.83
VIMP08670 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.6□□□□□ -1.83
VIMP08670 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VIMP08670 AL035246.1-201ENST00000433554 1255 ntBASIC3.6□□□□□ -1.83
VIMP08670 MTCO2P20-201ENST00000437339 673 ntBASIC3.6□□□□□ -1.83
VIMP08670 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.6□□□□□ -1.83
VIMP08670 HSPE1P28-201ENST00000443139 211 ntBASIC3.6□□□□□ -1.83
VIMP08670 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.6□□□□□ -1.83
VIMP08670 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.6□□□□□ -1.83
VIMP08670 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.6□□□□□ -1.83
VIMP08670 snoU13.4-201ENST00000458916 104 ntBASIC3.6□□□□□ -1.83
VIMP08670 RPS4XP10-201ENST00000465034 731 ntBASIC3.6□□□□□ -1.83
VIMP08670 AC023424.2-201ENST00000493479 777 ntBASIC3.6□□□□□ -1.83
VIMP08670 AC096751.1-202ENST00000502691 1067 ntBASIC3.6□□□□□ -1.83
VIMP08670 AC114967.1-201ENST00000504890 259 ntBASIC3.6□□□□□ -1.83
VIMP08670 COX7A2P2-201ENST00000505291 250 ntBASIC3.6□□□□□ -1.83
VIMP08670 AC021146.8-201ENST00000507455 733 ntBASIC3.6□□□□□ -1.83
VIMP08670 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VIMP08670 AC022861.1-201ENST00000522981 663 ntBASIC3.6□□□□□ -1.83
VIMP08670 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.6□□□□□ -1.83
VIMP08670 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.6□□□□□ -1.83
VIMP08670 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.6□□□□□ -1.83
VIMP08670 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.6□□□□□ -1.83
VIMP08670 AC004024.1-201ENST00000549244 247 ntBASIC3.6□□□□□ -1.83
VIMP08670 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.6□□□□□ -1.83
VIMP08670 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VIMP08670 AGGF1P5-201ENST00000567900 919 ntBASIC3.6□□□□□ -1.83
VIMP08670 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.6□□□□□ -1.83
VIMP08670 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.6□□□□□ -1.83
VIMP08670 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.6□□□□□ -1.83
VIMP08670 VN1R78P-201ENST00000597393 564 ntBASIC3.6□□□□□ -1.83
VIMP08670 AC009220.3-201ENST00000604318 586 ntBASIC3.6□□□□□ -1.83
VIMP08670 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VIMP08670 MIR7703-201ENST00000620784 77 ntBASIC3.6□□□□□ -1.83
VIMP08670 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.6□□□□□ -1.83
VIMP08670 AL079343.1-201ENST00000572358 1771 ntBASIC3.6□□□□□ -1.83
VIMP08670 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.6□□□□□ -1.83
VIMP08670 AL390862.1-201ENST00000635467 1469 ntBASIC3.6□□□□□ -1.83
VIMP08670 AC097714.1-201ENST00000511272 1647 ntBASIC3.59□□□□□ -1.83
VIMP08670 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VIMP08670 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.59□□□□□ -1.83
VIMP08670 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VIMP08670 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.59□□□□□ -1.83
VIMP08670 RNU6-1074P-201ENST00000383995 104 ntBASIC3.59□□□□□ -1.83
VIMP08670 AC016397.1-201ENST00000412463 242 ntBASIC3.59□□□□□ -1.83
VIMP08670 MTATP6P27-201ENST00000416987 621 ntBASIC3.59□□□□□ -1.83
VIMP08670 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.59□□□□□ -1.83
VIMP08670 AC012498.1-201ENST00000424037 437 ntBASIC3.59□□□□□ -1.83
VIMP08670 BX890604.2-201ENST00000427883 474 ntBASIC3.59□□□□□ -1.83
VIMP08670 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.59□□□□□ -1.83
VIMP08670 EZH2P1-201ENST00000431167 291 ntBASIC3.59□□□□□ -1.83
VIMP08670 HIGD1AP11-201ENST00000438361 280 ntBASIC3.59□□□□□ -1.83
VIMP08670 FGF7P5-201ENST00000441829 291 ntBASIC3.59□□□□□ -1.83
VIMP08670 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.59□□□□□ -1.83
VIMP08670 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.59□□□□□ -1.83
VIMP08670 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.59□□□□□ -1.83
VIMP08670 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.59□□□□□ -1.83
VIMP08670 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.59□□□□□ -1.83
VIMP08670 MTCO3P11-201ENST00000455103 774 ntBASIC3.59□□□□□ -1.83
VIMP08670 HMGN2P16-201ENST00000456802 261 ntBASIC3.59□□□□□ -1.83
VIMP08670 HMGN1P18-201ENST00000457642 277 ntBASIC3.59□□□□□ -1.83
VIMP08670 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.59□□□□□ -1.83
VIMP08670 AC097493.1-201ENST00000463958 372 ntBASIC3.59□□□□□ -1.83
VIMP08670 AC108729.1-201ENST00000487812 947 ntBASIC3.59□□□□□ -1.83
VIMP08670 RNU6-1095P-201ENST00000516148 108 ntBASIC3.59□□□□□ -1.83
VIMP08670 RNU6-311P-201ENST00000516224 102 ntBASIC3.59□□□□□ -1.83
VIMP08670 MIR2276-201ENST00000516886 89 ntBASIC3.59□□□□□ -1.83
VIMP08670 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.59□□□□□ -1.83
VIMP08670 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VIMP08670 AC018630.1-201ENST00000541376 925 ntBASIC3.59□□□□□ -1.83
VIMP08670 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.59□□□□□ -1.83
VIMP08670 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.59□□□□□ -1.83
VIMP08670 NBEAP1-201ENST00000554452 979 ntBASIC3.59□□□□□ -1.83
VIMP08670 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.59□□□□□ -1.83
VIMP08670 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.59□□□□□ -1.83
VIMP08670 MTND4P33-201ENST00000556706 766 ntBASIC3.59□□□□□ -1.83
VIMP08670 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.59□□□□□ -1.83
VIMP08670 MTCO3P24-201ENST00000572729 782 ntBASIC3.59□□□□□ -1.83
VIMP08670 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.59□□□□□ -1.83
VIMP08670 AC053481.3-201ENST00000577881 843 ntBASIC3.59□□□□□ -1.83
VIMP08670 RN7SL600P-201ENST00000581811 299 ntBASIC3.59□□□□□ -1.83
VIMP08670 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.59□□□□□ -1.83
VIMP08670 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.59□□□□□ -1.83
VIMP08670 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.59□□□□□ -1.83
VIMP08670 AC006077.1-201ENST00000604746 343 ntBASIC3.59□□□□□ -1.83
VIMP08670 AP000240.1-201ENST00000609910 452 ntBASIC3.59□□□□□ -1.83
VIMP08670 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.59□□□□□ -1.83
VIMP08670 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.59□□□□□ -1.83
VIMP08670 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.59□□□□□ -1.83
VIMP08670 AL732618.1-201ENST00000623251 301 ntBASIC3.59□□□□□ -1.83
VIMP08670 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.59□□□□□ -1.83
VIMP08670 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.59□□□□□ -1.84
VIMP08670 AC004972.1-201ENST00000623934 2209 ntBASIC3.59□□□□□ -1.84
VIMP08670 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.59□□□□□ -1.84
VIMP08670 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.59□□□□□ -1.84
VIMP08670 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms