Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 RPL21P18-201ENST00000469899 480 ntBASIC3.51□□□□□ -1.85
CHRNA1P02708 AC097462.2-201ENST00000504623 481 ntBASIC3.51□□□□□ -1.85
CHRNA1P02708 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
CHRNA1P02708 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.51□□□□□ -1.85
CHRNA1P02708 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.51□□□□□ -1.85
CHRNA1P02708 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.51□□□□□ -1.85
CHRNA1P02708 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.51□□□□□ -1.85
CHRNA1P02708 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.51□□□□□ -1.85
CHRNA1P02708 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.51□□□□□ -1.85
CHRNA1P02708 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.51□□□□□ -1.85
CHRNA1P02708 AC068339.2-201ENST00000534395 618 ntBASIC3.51□□□□□ -1.85
CHRNA1P02708 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.51□□□□□ -1.85
CHRNA1P02708 AC107954.1-201ENST00000565906 727 ntBASIC3.51□□□□□ -1.85
CHRNA1P02708 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CHRNA1P02708 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.51□□□□□ -1.85
CHRNA1P02708 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.51□□□□□ -1.85
CHRNA1P02708 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CHRNA1P02708 SNRPGP15-201ENST00000600149 222 ntBASIC3.51□□□□□ -1.85
CHRNA1P02708 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.51□□□□□ -1.85
CHRNA1P02708 AC113368.1-201ENST00000603736 382 ntBASIC3.51□□□□□ -1.85
CHRNA1P02708 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.51□□□□□ -1.85
CHRNA1P02708 AL109620.1-201ENST00000618738 1197 ntBASIC3.51□□□□□ -1.85
CHRNA1P02708 AL138960.2-201ENST00000625145 535 ntBASIC3.51□□□□□ -1.85
CHRNA1P02708 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CHRNA1P02708 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHRNA1P02708 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHRNA1P02708 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
CHRNA1P02708 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHRNA1P02708 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHRNA1P02708 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHRNA1P02708 ZNF37BP-203ENST00000452306 1352 ntBASIC3.51□□□□□ -1.85
CHRNA1P02708 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
CHRNA1P02708 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.5□□□□□ -1.85
CHRNA1P02708 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHRNA1P02708 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHRNA1P02708 DBF4P1-201ENST00000412976 1892 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CHRNA1P02708 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHRNA1P02708 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHRNA1P02708 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CHRNA1P02708 RNU5B-1-201ENST00000363286 116 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 RNU1-140P-201ENST00000365040 165 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 RNU6-619P-201ENST00000365146 108 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CHRNA1P02708 RNU6-921P-201ENST00000384361 107 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 RNU6-837P-201ENST00000391056 108 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CHRNA1P02708 AC244098.2-201ENST00000422068 99 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.5□□□□□ -1.85
CHRNA1P02708 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.5□□□□□ -1.85
CHRNA1P02708 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.5□□□□□ -1.85
CHRNA1P02708 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.5□□□□□ -1.85
CHRNA1P02708 ELOCP23-201ENST00000452014 332 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 ARPC3P2-201ENST00000457786 533 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 AC087312.1-201ENST00000471411 480 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 SYPL1P1-201ENST00000473622 768 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 AC011352.3-201ENST00000505162 593 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 AC091860.1-201ENST00000505723 432 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 AC048346.1-201ENST00000510247 144 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.5□□□□□ -1.85
CHRNA1P02708 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CHRNA1P02708 AP003385.6-201ENST00000531603 374 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.5□□□□□ -1.85
CHRNA1P02708 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.5□□□□□ -1.85
CHRNA1P02708 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.5□□□□□ -1.85
CHRNA1P02708 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CHRNA1P02708 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.5□□□□□ -1.85
CHRNA1P02708 MIR4474-201ENST00000579189 78 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 VN1R87P-201ENST00000596706 487 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 AL450489.1-201ENST00000612071 468 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.5□□□□□ -1.85
CHRNA1P02708 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CHRNA1P02708 AC106858.1-201ENST00000637497 429 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 AC006927.2-201ENST00000639256 389 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHRNA1P02708 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHRNA1P02708 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CHRNA1P02708 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CHRNA1P02708 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.5□□□□□ -1.85
CHRNA1P02708 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.5□□□□□ -1.85
CHRNA1P02708 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.49□□□□□ -1.85
CHRNA1P02708 AF117829.1-206ENST00000621883 3802 ntBASIC3.49□□□□□ -1.85
CHRNA1P02708 OR5BR1P-201ENST00000524992 1330 ntBASIC3.49□□□□□ -1.85
CHRNA1P02708 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CHRNA1P02708 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.49□□□□□ -1.85
CHRNA1P02708 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHRNA1P02708 RNU6-115P-201ENST00000364310 107 ntBASIC3.49□□□□□ -1.85
CHRNA1P02708 RNU6-335P-201ENST00000364563 113 ntBASIC3.49□□□□□ -1.85
CHRNA1P02708 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.49□□□□□ -1.85
CHRNA1P02708 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.49□□□□□ -1.85
CHRNA1P02708 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.49□□□□□ -1.85
CHRNA1P02708 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.49□□□□□ -1.85
CHRNA1P02708 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.49□□□□□ -1.85
CHRNA1P02708 RPL23AP82-202ENST00000427528 469 ntBASIC3.49□□□□□ -1.85
CHRNA1P02708 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.49□□□□□ -1.85
CHRNA1P02708 MTCYBP15-201ENST00000433123 1127 ntBASIC3.49□□□□□ -1.85
CHRNA1P02708 MRPS31P2-201ENST00000451581 518 ntBASIC3.49□□□□□ -1.85
CHRNA1P02708 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.49□□□□□ -1.85
CHRNA1P02708 CENPBD1P1-201ENST00000464061 469 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms