Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 DPRXP1-201ENST00000426312 460 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AL353705.1-201ENST00000433468 480 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 RRM2P4-201ENST00000441721 562 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 COX6CP2-201ENST00000444980 225 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AL034418.1-201ENST00000448675 860 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 HMGB1P15-201ENST00000453854 435 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 HMGN2P16-201ENST00000456802 261 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 UBDP1-202ENST00000457888 382 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AC012181.1-201ENST00000479895 423 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AC093853.1-201ENST00000515689 483 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 RNU6-276P-201ENST00000516114 96 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AC084824.1-201ENST00000550917 1005 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 MIR3908-201ENST00000579798 126 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AC006557.5-201ENST00000603126 811 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AC012669.1-201ENST00000603209 283 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AF129408.1-201ENST00000608767 431 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AC018645.2-201ENST00000609151 472 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AL590282.1-201ENST00000610379 1136 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AC069234.5-201ENST00000611056 416 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AC084824.4-201ENST00000620106 731 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AC068831.8-201ENST00000620171 435 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AC109454.4-201ENST00000623411 649 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AC104985.3-201ENST00000623479 597 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AC091903.1-201ENST00000624322 454 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 AC091925.2-201ENST00000625059 256 ntBASIC2.48□□□□□ -2.01
HLA-DQA1P01909 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.48□□□□□ -2.01
HLA-DQA1P01909 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 AP005901.5-201ENST00000545779 1796 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 MIR554-201ENST00000384874 96 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 AL031121.1-201ENST00000406553 254 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 RNU6-712P-201ENST00000410558 100 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 CRYBB2P1-203ENST00000415709 538 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 OR4K6P-201ENST00000416478 897 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 RPL7P44-201ENST00000424827 742 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 AC079780.1-201ENST00000428259 207 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 GTF2IP3-201ENST00000433887 494 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 GTF2IP7-202ENST00000436677 309 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 RNF2P1-201ENST00000442955 1010 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 VN1R10P-201ENST00000447106 875 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 AL445669.2-201ENST00000454425 421 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 MTND2P39-201ENST00000457230 764 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 AC092757.1-201ENST00000467293 467 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 RPS4XP13-201ENST00000483219 789 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 MTND3P3-201ENST00000505004 126 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 AC112198.1-201ENST00000505369 1220 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 AC002456.2-201ENST00000509356 380 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 AC004062.1-201ENST00000509926 645 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 RNU6-27P-201ENST00000516146 107 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 RANP9-201ENST00000519957 271 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 AC027309.2-201ENST00000520566 192 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 TMF1P1-201ENST00000576058 373 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 AC012119.1-201ENST00000603184 222 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 AC096947.1-201ENST00000603233 470 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 AC128687.1-201ENST00000605304 619 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 AC112220.2-201ENST00000605513 533 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 AL451074.6-201ENST00000608512 729 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 AC004832.5-201ENST00000608677 401 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 AC006963.1-201ENST00000624003 1052 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 MTCO1P23-201ENST00000415223 1526 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
HLA-DQA1P01909 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.47□□□□□ -2.01
HLA-DQA1P01909 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.46□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms