Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.58□□□□□ -1.84
PDGFBP01127 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDGFBP01127 AC002546.1-201ENST00000588041 2504 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 SNORD82-201ENST00000365530 70 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 AL357075.1-201ENST00000404107 726 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 AL139095.1-201ENST00000404326 391 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 RNA5SP129-201ENST00000410276 118 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PDGFBP01127 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.58□□□□□ -1.84
PDGFBP01127 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.58□□□□□ -1.84
PDGFBP01127 AC092393.1-201ENST00000439625 742 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.58□□□□□ -1.84
PDGFBP01127 AC006480.1-201ENST00000449887 378 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.58□□□□□ -1.84
PDGFBP01127 snoU13.4-201ENST00000458916 104 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.58□□□□□ -1.84
PDGFBP01127 PABPC1P3-201ENST00000469174 459 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 AC006445.1-201ENST00000491925 405 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 DYNLL1P6-201ENST00000503440 264 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 AC084024.2-201ENST00000503480 791 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 AC093767.1-201ENST00000504523 156 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 RPL12P22-201ENST00000519073 490 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 OR5M7P-201ENST00000526140 972 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.58□□□□□ -1.84
PDGFBP01127 AP001317.1-201ENST00000531194 960 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.58□□□□□ -1.84
PDGFBP01127 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.58□□□□□ -1.84
PDGFBP01127 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.58□□□□□ -1.84
PDGFBP01127 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.58□□□□□ -1.84
PDGFBP01127 AC009101.1-201ENST00000568135 242 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.58□□□□□ -1.84
PDGFBP01127 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.58□□□□□ -1.84
PDGFBP01127 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.58□□□□□ -1.84
PDGFBP01127 AP005137.2-201ENST00000609238 400 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.58□□□□□ -1.84
PDGFBP01127 AL359715.5-201ENST00000623431 443 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 AC104985.3-201ENST00000623479 597 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.58□□□□□ -1.84
PDGFBP01127 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.58□□□□□ -1.84
PDGFBP01127 OR4G3P-201ENST00000633500 913 ntBASIC3.58□□□□□ -1.84
PDGFBP01127 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDGFBP01127 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.58□□□□□ -1.84
PDGFBP01127 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.57□□□□□ -1.84
PDGFBP01127 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PDGFBP01127 RNU6-1066P-201ENST00000363573 105 ntBASIC3.57□□□□□ -1.84
PDGFBP01127 RNU6-7-201ENST00000364784 107 ntBASIC3.57□□□□□ -1.84
PDGFBP01127 RNU6-8-201ENST00000365467 107 ntBASIC3.57□□□□□ -1.84
PDGFBP01127 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.57□□□□□ -1.84
PDGFBP01127 SNORA44-201ENST00000384584 132 ntBASIC3.57□□□□□ -1.84
PDGFBP01127 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.57□□□□□ -1.84
PDGFBP01127 MTCO2P8-201ENST00000412213 658 ntBASIC3.57□□□□□ -1.84
PDGFBP01127 JKAMPP1-201ENST00000413804 919 ntBASIC3.57□□□□□ -1.84
PDGFBP01127 RPS7P9-201ENST00000414704 586 ntBASIC3.57□□□□□ -1.84
PDGFBP01127 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.57□□□□□ -1.84
PDGFBP01127 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.57□□□□□ -1.84
PDGFBP01127 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.57□□□□□ -1.84
PDGFBP01127 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.57□□□□□ -1.84
PDGFBP01127 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.57□□□□□ -1.84
PDGFBP01127 MTCYBP42-201ENST00000444653 1130 ntBASIC3.57□□□□□ -1.84
PDGFBP01127 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.57□□□□□ -1.84
PDGFBP01127 NUP58P1-201ENST00000502546 1738 ntBASIC3.57□□□□□ -1.84
PDGFBP01127 AC108078.3-201ENST00000502633 489 ntBASIC3.57□□□□□ -1.84
PDGFBP01127 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.57□□□□□ -1.84
PDGFBP01127 AC025554.1-201ENST00000505641 188 ntBASIC3.57□□□□□ -1.84
PDGFBP01127 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.57□□□□□ -1.84
PDGFBP01127 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.57□□□□□ -1.84
PDGFBP01127 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.57□□□□□ -1.84
PDGFBP01127 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
PDGFBP01127 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.57□□□□□ -1.84
PDGFBP01127 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.57□□□□□ -1.84
PDGFBP01127 AC027287.1-201ENST00000553115 1453 ntBASIC3.57□□□□□ -1.84
PDGFBP01127 MIR3945-201ENST00000581853 98 ntBASIC3.57□□□□□ -1.84
PDGFBP01127 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.57□□□□□ -1.84
PDGFBP01127 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.57□□□□□ -1.84
PDGFBP01127 AL160237.3-201ENST00000604114 1013 ntBASIC3.57□□□□□ -1.84
PDGFBP01127 AL050303.3-201ENST00000613704 284 ntBASIC3.57□□□□□ -1.84
PDGFBP01127 ATP5A1P2-202ENST00000616464 443 ntBASIC3.57□□□□□ -1.84
PDGFBP01127 AL158163.2-201ENST00000619110 700 ntBASIC3.57□□□□□ -1.84
PDGFBP01127 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.57□□□□□ -1.84
PDGFBP01127 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.57□□□□□ -1.84
PDGFBP01127 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.57□□□□□ -1.84
PDGFBP01127 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.57□□□□□ -1.84
PDGFBP01127 AL645937.1-201ENST00000641739 1652 ntBASIC3.57□□□□□ -1.84
PDGFBP01127 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDGFBP01127 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.57□□□□□ -1.84
PDGFBP01127 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFBP01127 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
PDGFBP01127 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PDGFBP01127 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFBP01127 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFBP01127 MIR422A-201ENST00000362286 90 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 DEFB109C-201ENST00000382575 264 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 DEFB109B-201ENST00000382656 264 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 Y_RNA.472-201ENST00000384322 102 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 RPL23AP47-201ENST00000408017 460 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 RNU4-65P-201ENST00000410473 140 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 RNA5SP80-201ENST00000410475 111 ntBASIC3.56□□□□□ -1.84
PDGFBP01127 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.56□□□□□ -1.84
PDGFBP01127 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms