Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC090079.2-201ENST00000575289 768 ntBASIC3.08□□□□□ -1.92
CTDNEP1O95476 AC012254.4-201ENST00000588843 273 ntBASIC3.08□□□□□ -1.92
CTDNEP1O95476 AL513477.2-201ENST00000607858 568 ntBASIC3.08□□□□□ -1.92
CTDNEP1O95476 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CTDNEP1O95476 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CTDNEP1O95476 FAM157B-203ENST00000639350 358 ntBASIC3.08□□□□□ -1.92
CTDNEP1O95476 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CTDNEP1O95476 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.08□□□□□ -1.92
CTDNEP1O95476 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTDNEP1O95476 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CTDNEP1O95476 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTDNEP1O95476 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CTDNEP1O95476 MTND5P11-201ENST00000511037 1812 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 AC092435.3-201ENST00000565538 3654 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 OR5J1P-201ENST00000313544 939 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 SNORA7.2-201ENST00000364446 145 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CTDNEP1O95476 RNU6-98P-201ENST00000384173 107 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 MIR142-201ENST00000384835 87 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 ATF1P1-201ENST00000406040 927 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 TRIAP1P1-201ENST00000427062 225 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.07□□□□□ -1.92
CTDNEP1O95476 AC005189.1-201ENST00000431286 310 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 CKS1BP5-201ENST00000434172 273 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 HMGN2P20-201ENST00000437531 273 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 RPS27AP1-201ENST00000475545 471 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.07□□□□□ -1.92
CTDNEP1O95476 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.07□□□□□ -1.92
CTDNEP1O95476 AC034159.1-201ENST00000513885 583 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.07□□□□□ -1.92
CTDNEP1O95476 RNA5SP282-201ENST00000516355 108 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 RN7SKP277-201ENST00000516895 283 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 OR5AK3P-201ENST00000527486 1297 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.07□□□□□ -1.92
CTDNEP1O95476 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.07□□□□□ -1.92
CTDNEP1O95476 MIR3690-201ENST00000580266 75 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.07□□□□□ -1.92
CTDNEP1O95476 VN1R92P-201ENST00000598511 928 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 AC098483.2-201ENST00000603158 454 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 AC016877.3-201ENST00000606778 504 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
CTDNEP1O95476 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.07□□□□□ -1.92
CTDNEP1O95476 MIR8084-201ENST00000614105 89 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.07□□□□□ -1.92
CTDNEP1O95476 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.07□□□□□ -1.92
CTDNEP1O95476 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CTDNEP1O95476 AL136164.4-201ENST00000625013 2135 ntBASIC3.07□□□□□ -1.92
CTDNEP1O95476 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
CTDNEP1O95476 GNG5P1-201ENST00000255500 204 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CTDNEP1O95476 SNORA51.2-201ENST00000364595 132 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 RNU6-609P-201ENST00000365459 107 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CTDNEP1O95476 MIR9-1-201ENST00000385198 89 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 RNA5SP210-201ENST00000391034 120 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CTDNEP1O95476 RNU2-21P-201ENST00000410368 188 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.06□□□□□ -1.92
CTDNEP1O95476 TATDN1P1-201ENST00000414123 891 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 NUP35P2-201ENST00000416748 943 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.06□□□□□ -1.92
CTDNEP1O95476 RPS15AP40-201ENST00000419621 391 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.06□□□□□ -1.92
CTDNEP1O95476 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.06□□□□□ -1.92
CTDNEP1O95476 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.06□□□□□ -1.92
CTDNEP1O95476 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.06□□□□□ -1.92
CTDNEP1O95476 AC097499.1-201ENST00000444277 208 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 COX6CP2-201ENST00000444980 225 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.06□□□□□ -1.92
CTDNEP1O95476 HMGN2P16-201ENST00000456802 261 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 ARPC3P2-201ENST00000457786 533 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 VN1R17P-201ENST00000472048 1090 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 AC108860.1-201ENST00000484521 383 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.06□□□□□ -1.92
CTDNEP1O95476 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.06□□□□□ -1.92
CTDNEP1O95476 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.06□□□□□ -1.92
CTDNEP1O95476 TMEM248P1-201ENST00000510579 951 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 MTCO1P24-201ENST00000515438 1558 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 AP003102.1-201ENST00000525638 661 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CTDNEP1O95476 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.06□□□□□ -1.92
CTDNEP1O95476 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CTDNEP1O95476 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.06□□□□□ -1.92
CTDNEP1O95476 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
CTDNEP1O95476 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.06□□□□□ -1.92
CTDNEP1O95476 AC106734.1-201ENST00000568646 663 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 MTND4P34-201ENST00000572715 1371 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 MIR4474-201ENST00000579189 78 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 AC138761.3-201ENST00000579993 334 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 VN1R90P-201ENST00000595717 726 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 ATP1B3P1-201ENST00000605365 821 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 AC024023.1-201ENST00000624530 922 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CTDNEP1O95476 MFSD8-213ENST00000641134 1327 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CTDNEP1O95476 MAPK10-362ENST00000641864 4484 ntBASIC3.06□□□□□ -1.92
CTDNEP1O95476 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CTDNEP1O95476 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms