Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 MIR512-1-201ENST00000384913 84 ntBASIC2.92□□□□□ -1.94
SHOX2O60902 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
SHOX2O60902 UBE2V1P2-201ENST00000397758 440 ntBASIC2.92□□□□□ -1.94
SHOX2O60902 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.92□□□□□ -1.94
SHOX2O60902 AC245052.5-201ENST00000416320 649 ntBASIC2.92□□□□□ -1.94
SHOX2O60902 TOMM22P1-201ENST00000418578 312 ntBASIC2.92□□□□□ -1.94
SHOX2O60902 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.92□□□□□ -1.94
SHOX2O60902 AC008280.2-201ENST00000455473 307 ntBASIC2.92□□□□□ -1.94
SHOX2O60902 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.92□□□□□ -1.94
SHOX2O60902 BX510359.1-201ENST00000456973 237 ntBASIC2.92□□□□□ -1.94
SHOX2O60902 RN7SL807P-201ENST00000470923 297 ntBASIC2.92□□□□□ -1.94
SHOX2O60902 KC877373.1-201ENST00000479066 408 ntBASIC2.92□□□□□ -1.94
SHOX2O60902 AC026412.2-201ENST00000512270 1075 ntBASIC2.92□□□□□ -1.94
SHOX2O60902 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.92□□□□□ -1.94
SHOX2O60902 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.92□□□□□ -1.94
SHOX2O60902 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SHOX2O60902 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.92□□□□□ -1.94
SHOX2O60902 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SHOX2O60902 AC107954.1-201ENST00000565906 727 ntBASIC2.92□□□□□ -1.94
SHOX2O60902 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
SHOX2O60902 OR4G1P-201ENST00000588632 938 ntBASIC2.92□□□□□ -1.94
SHOX2O60902 TPMTP1-201ENST00000592307 737 ntBASIC2.92□□□□□ -1.94
SHOX2O60902 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.92□□□□□ -1.94
SHOX2O60902 AC125494.3-201ENST00000602759 455 ntBASIC2.92□□□□□ -1.94
SHOX2O60902 AL109653.1-201ENST00000603091 248 ntBASIC2.92□□□□□ -1.94
SHOX2O60902 AC009039.2-201ENST00000624524 529 ntBASIC2.92□□□□□ -1.94
SHOX2O60902 AC083865.1-201ENST00000636634 831 ntBASIC2.92□□□□□ -1.94
SHOX2O60902 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SHOX2O60902 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SHOX2O60902 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
SHOX2O60902 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.91□□□□□ -1.94
SHOX2O60902 MTND4P8-201ENST00000514997 1362 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 AC009501.3-201ENST00000605001 1352 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.91□□□□□ -1.94
SHOX2O60902 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.91□□□□□ -1.94
SHOX2O60902 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
SHOX2O60902 GNG5P1-201ENST00000255500 204 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 MIR6073-201ENST00000352083 89 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 VTRNA1-1-201ENST00000363120 99 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 AC234772.1-201ENST00000377927 937 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SHOX2O60902 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SHOX2O60902 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.91□□□□□ -1.94
SHOX2O60902 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.91□□□□□ -1.94
SHOX2O60902 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.91□□□□□ -1.94
SHOX2O60902 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.91□□□□□ -1.94
SHOX2O60902 TRIM60P18-201ENST00000441518 828 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 AC016696.1-201ENST00000446949 318 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 AC087879.1-201ENST00000474343 374 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 AL024509.2-201ENST00000493462 493 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.91□□□□□ -1.94
SHOX2O60902 RPS27P27-201ENST00000498779 255 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 Y_RNA.676-201ENST00000516393 96 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.91□□□□□ -1.94
SHOX2O60902 AF279873.1-201ENST00000523393 313 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.91□□□□□ -1.94
SHOX2O60902 AC027104.1-201ENST00000563702 681 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.91□□□□□ -1.94
SHOX2O60902 MIR3605-201ENST00000583214 100 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 AC005046.1-201ENST00000608515 625 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 AL390240.1-201ENST00000612950 384 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 AC024595.1-201ENST00000623088 387 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 AC090617.7-201ENST00000623952 126 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 AC006963.1-201ENST00000624003 1052 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 AC020923.1-201ENST00000624021 917 ntBASIC2.91□□□□□ -1.94
SHOX2O60902 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.91□□□□□ -1.94
SHOX2O60902 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
SHOX2O60902 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SHOX2O60902 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
SHOX2O60902 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SHOX2O60902 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.9□□□□□ -1.94
SHOX2O60902 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.9□□□□□ -1.94
SHOX2O60902 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SHOX2O60902 SNORD115-48-201ENST00000364764 76 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 SNORA7.4-201ENST00000384249 137 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 SNORD15B-201ENST00000384714 146 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 TAF9BP1-201ENST00000396646 746 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 AC073264.1-201ENST00000411508 416 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 AC092745.2-202ENST00000411880 369 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 ZNF965P-201ENST00000432501 817 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 AC011242.1-201ENST00000433596 1158 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 CR769767.1-201ENST00000436337 346 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 RPL23AP74-201ENST00000437246 471 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.9□□□□□ -1.95
SHOX2O60902 RPL32P28-201ENST00000443577 397 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.9□□□□□ -1.95
SHOX2O60902 AL034418.1-201ENST00000448675 860 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 AL162389.1-201ENST00000449233 177 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 AC009961.3-201ENST00000449832 765 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SHOX2O60902 NPM1P13-201ENST00000452663 865 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 RPS24P6-201ENST00000452670 400 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 DNAJC19P8-201ENST00000452887 259 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 NECAP1P2-201ENST00000455668 727 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 snoU13.3-201ENST00000459441 104 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 AC003982.1-202ENST00000469928 248 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.9□□□□□ -1.95
SHOX2O60902 ARL4AP2-201ENST00000507378 601 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 AC008565.1-201ENST00000509046 885 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms