Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 Y_RNA.75-201ENST00000362927 97 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 RN7SKP128-201ENST00000364270 303 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 RNA5SP173-201ENST00000364857 136 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 CYB5AP4-201ENST00000396692 399 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 DBIP1-201ENST00000401435 260 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 RPS16P5-201ENST00000406501 404 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 RPL7L1P9-201ENST00000431298 745 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 AL049745.1-201ENST00000433953 286 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.98□□□□□ -1.45
GFRA3O60609 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.98□□□□□ -1.45
GFRA3O60609 AL451136.1-201ENST00000435399 325 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.98□□□□□ -1.45
GFRA3O60609 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.98□□□□□ -1.45
GFRA3O60609 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.98□□□□□ -1.45
GFRA3O60609 AC005229.2-201ENST00000456995 399 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 RN7SL269P-201ENST00000467795 305 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 RPL21P103-201ENST00000479921 488 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 AC091959.1-201ENST00000495857 238 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 RPL23AP55-201ENST00000498163 452 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 AC055733.3-201ENST00000505214 523 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 AC010343.2-201ENST00000510162 224 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.98□□□□□ -1.45
GFRA3O60609 RN7SKP179-201ENST00000516126 217 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.98□□□□□ -1.45
GFRA3O60609 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.98□□□□□ -1.45
GFRA3O60609 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.98□□□□□ -1.45
GFRA3O60609 MTND5P34-201ENST00000568888 325 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 MIR5696-201ENST00000578474 85 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 MIR3976-201ENST00000606807 139 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
GFRA3O60609 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA3O60609 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA3O60609 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA3O60609 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA3O60609 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.98□□□□□ -1.45
GFRA3O60609 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA3O60609 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA3O60609 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA3O60609 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC5.98□□□□□ -1.45
GFRA3O60609 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.98□□□□□ -1.45
GFRA3O60609 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA3O60609 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA3O60609 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
GFRA3O60609 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
GFRA3O60609 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
GFRA3O60609 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC5.97□□□□□ -1.45
GFRA3O60609 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA3O60609 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA3O60609 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA3O60609 AP001157.1-201ENST00000550837 2339 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA3O60609 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA3O60609 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC5.97□□□□□ -1.45
GFRA3O60609 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC5.97□□□□□ -1.45
GFRA3O60609 RNU6-37P-201ENST00000362692 107 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RNU6-11P-201ENST00000364234 107 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RNU6-7-201ENST00000364784 107 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RNU5E-7P-201ENST00000365290 117 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RNU6-8-201ENST00000365467 107 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RNU6-25P-201ENST00000383873 107 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RNU6-1-201ENST00000383898 107 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RNU6-32P-201ENST00000383948 107 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RNU6-4P-201ENST00000384205 107 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RNU6-5P-201ENST00000384238 107 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RNU6-17P-201ENST00000384245 107 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RNU6-13P-201ENST00000384248 107 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RNU6-3P-201ENST00000384314 107 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RNU6-18P-201ENST00000384527 107 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RNU6-12P-201ENST00000384604 107 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RNU6-2-201ENST00000384627 107 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RNU6-29P-201ENST00000384637 107 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RNU6-41P-201ENST00000384741 107 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RNU6-9-201ENST00000384776 107 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
GFRA3O60609 RN7SKP27-201ENST00000410684 333 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RNU2-6P-201ENST00000411404 190 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 AC096921.1-201ENST00000411661 375 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RPL23AP26-201ENST00000412728 464 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.97□□□□□ -1.45
GFRA3O60609 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.97□□□□□ -1.45
GFRA3O60609 NDUFB4P7-201ENST00000423198 363 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.97□□□□□ -1.45
GFRA3O60609 UQCRBP2-201ENST00000447827 297 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.97□□□□□ -1.45
GFRA3O60609 RN7SL583P-201ENST00000475692 287 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 AC083982.1-201ENST00000485679 344 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RPS29P24-201ENST00000486345 171 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.97□□□□□ -1.45
GFRA3O60609 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.97□□□□□ -1.45
GFRA3O60609 RNU6-615P-201ENST00000516065 106 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 Y_RNA.677-201ENST00000516401 85 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.97□□□□□ -1.45
GFRA3O60609 HMGN2P36-201ENST00000529541 409 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.97□□□□□ -1.45
GFRA3O60609 MIR1254-2-201ENST00000579553 63 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 RNU6-6P-201ENST00000606623 107 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 SNORD113-5-201ENST00000607261 78 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 AC009318.2-201ENST00000610917 651 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 AP003789.1-201ENST00000617737 605 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms