Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.3□□□□□ -1.88
LCMT2O60294 MTND1P8-201ENST00000571424 950 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.3□□□□□ -1.88
LCMT2O60294 MTND3P19-201ENST00000603825 345 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 U3.45-201ENST00000607547 219 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 AL078595.3-201ENST00000623815 1166 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LCMT2O60294 LINC02211-204ENST00000642024 1070 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LCMT2O60294 MFSD8-233ENST00000641482 4860 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LCMT2O60294 AF117829.1-206ENST00000621883 3802 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LCMT2O60294 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.29□□□□□ -1.88
LCMT2O60294 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.29□□□□□ -1.88
LCMT2O60294 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.29□□□□□ -1.88
LCMT2O60294 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LCMT2O60294 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.29□□□□□ -1.88
LCMT2O60294 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LCMT2O60294 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LCMT2O60294 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
LCMT2O60294 SNORA71.3-201ENST00000362582 128 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 RNA5SP119-201ENST00000362715 117 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 RNU6-492P-201ENST00000363035 104 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 RNU6-1066P-201ENST00000363573 105 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 MIR449B-201ENST00000384995 97 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 MIR670-201ENST00000390142 98 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 RNU6-821P-201ENST00000390995 107 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 RNU6-1300P-201ENST00000391046 108 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LCMT2O60294 AC093578.1-201ENST00000415219 368 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 AC245052.5-201ENST00000416320 649 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 Z75741.2-201ENST00000417272 1167 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 NANOGP5-201ENST00000424456 877 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 RPL7P44-201ENST00000424827 742 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 DPRXP1-201ENST00000426312 460 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.29□□□□□ -1.88
LCMT2O60294 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.29□□□□□ -1.88
LCMT2O60294 SETP5-201ENST00000437270 562 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 AC092393.1-201ENST00000439625 742 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 RPL23AP16-201ENST00000441715 421 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
LCMT2O60294 RPL12P26-201ENST00000452430 487 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 DUXAP8-207ENST00000456786 622 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 snoU13.4-201ENST00000458916 104 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 RPL23AP44-201ENST00000482216 473 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 VPS26AP1-201ENST00000483197 979 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 RPL21P129-201ENST00000491732 478 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 AC134050.1-201ENST00000495088 933 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 ARL2BPP6-201ENST00000512757 439 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 RN7SKP60-201ENST00000516985 239 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.29□□□□□ -1.88
LCMT2O60294 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.29□□□□□ -1.88
LCMT2O60294 ZNF705CP-201ENST00000530515 889 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.29□□□□□ -1.88
LCMT2O60294 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LCMT2O60294 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.29□□□□□ -1.88
LCMT2O60294 AL845331.3-202ENST00000562856 261 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.29□□□□□ -1.88
LCMT2O60294 AC087481.2-201ENST00000565492 330 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 MIR3912-201ENST00000577566 105 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 MIR4425-201ENST00000580572 84 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 AC006254.3-201ENST00000603353 884 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.29□□□□□ -1.88
LCMT2O60294 AC006329.2-201ENST00000611491 394 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 DUXAP10-204ENST00000612052 616 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 AL050303.3-201ENST00000613704 284 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.29□□□□□ -1.88
LCMT2O60294 OR8B1P-202ENST00000641132 1178 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 AC032011.1-201ENST00000611703 1549 ntBASIC3.29□□□□□ -1.88
LCMT2O60294 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LCMT2O60294 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.28□□□□□ -1.88
LCMT2O60294 AC091152.2-201ENST00000591628 2569 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LCMT2O60294 Y_RNA.408-201ENST00000383987 102 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 MIR591-201ENST00000385290 95 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 RNU6-1242P-201ENST00000391052 103 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.28□□□□□ -1.88
LCMT2O60294 RPS3AP25-201ENST00000411660 793 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 AL161449.1-201ENST00000414531 1199 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.28□□□□□ -1.88
LCMT2O60294 RPS3AP37-201ENST00000419176 745 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 AC092648.1-201ENST00000425870 423 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.28□□□□□ -1.88
LCMT2O60294 VN1R34P-201ENST00000447387 883 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.28□□□□□ -1.88
LCMT2O60294 SSXP4-201ENST00000451349 245 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.28□□□□□ -1.88
LCMT2O60294 AC010301.1-201ENST00000473936 355 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 RPS27AP1-201ENST00000475545 471 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 AC012181.1-201ENST00000479895 423 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.28□□□□□ -1.88
LCMT2O60294 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LCMT2O60294 SNORA70.19-201ENST00000516717 90 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 RNA5SP468-201ENST00000516782 93 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.28□□□□□ -1.88
LCMT2O60294 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.28□□□□□ -1.88
LCMT2O60294 AC010198.2-201ENST00000550612 259 ntBASIC3.28□□□□□ -1.88
LCMT2O60294 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms