Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RNU6-1334P-201ENST00000516032 105 ntBASIC3.64□□□□□ -1.83
CHD1O14646 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.64□□□□□ -1.83
CHD1O14646 AL670379.6-201ENST00000603753 252 ntBASIC3.64□□□□□ -1.83
CHD1O14646 AL670379.11-201ENST00000604059 253 ntBASIC3.64□□□□□ -1.83
CHD1O14646 AL670379.10-201ENST00000604330 253 ntBASIC3.64□□□□□ -1.83
CHD1O14646 AC008162.1-201ENST00000604718 254 ntBASIC3.64□□□□□ -1.83
CHD1O14646 AL670379.1-201ENST00000604752 252 ntBASIC3.64□□□□□ -1.83
CHD1O14646 AL670379.2-201ENST00000604983 252 ntBASIC3.64□□□□□ -1.83
CHD1O14646 AL670379.5-201ENST00000605253 252 ntBASIC3.64□□□□□ -1.83
CHD1O14646 AL670379.4-201ENST00000605279 254 ntBASIC3.64□□□□□ -1.83
CHD1O14646 AL670379.12-201ENST00000605291 253 ntBASIC3.64□□□□□ -1.83
CHD1O14646 AL670379.8-201ENST00000605353 252 ntBASIC3.64□□□□□ -1.83
CHD1O14646 AL670379.9-201ENST00000605428 253 ntBASIC3.64□□□□□ -1.83
CHD1O14646 AL670379.7-201ENST00000605823 252 ntBASIC3.64□□□□□ -1.83
CHD1O14646 AC245517.5-201ENST00000611529 162 ntBASIC3.64□□□□□ -1.83
CHD1O14646 MIR7153-201ENST00000637758 57 ntBASIC3.64□□□□□ -1.83
CHD1O14646 GTF2H2B-203ENST00000508065 1432 ntBASIC3.64□□□□□ -1.83
CHD1O14646 RNU6-457P-201ENST00000363999 107 ntBASIC3.64□□□□□ -1.83
CHD1O14646 MIR499A-201ENST00000384903 122 ntBASIC3.64□□□□□ -1.83
CHD1O14646 RNA5SP270-201ENST00000411361 118 ntBASIC3.64□□□□□ -1.83
CHD1O14646 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.64□□□□□ -1.83
CHD1O14646 NDUFB4P6-201ENST00000436819 366 ntBASIC3.64□□□□□ -1.83
CHD1O14646 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.64□□□□□ -1.83
CHD1O14646 AC068657.1-201ENST00000520807 306 ntBASIC3.64□□□□□ -1.83
CHD1O14646 AP000857.1-201ENST00000532151 543 ntBASIC3.64□□□□□ -1.83
CHD1O14646 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.64□□□□□ -1.83
CHD1O14646 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.64□□□□□ -1.83
CHD1O14646 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.64□□□□□ -1.83
CHD1O14646 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.64□□□□□ -1.83
CHD1O14646 YWHAEP7-203ENST00000622054 312 ntBASIC3.64□□□□□ -1.83
CHD1O14646 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.63□□□□□ -1.83
CHD1O14646 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CHD1O14646 XIAPP3-201ENST00000312918 795 ntBASIC3.63□□□□□ -1.83
CHD1O14646 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.63□□□□□ -1.83
CHD1O14646 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.63□□□□□ -1.83
CHD1O14646 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.63□□□□□ -1.83
CHD1O14646 AC011492.1-201ENST00000600023 315 ntBASIC3.63□□□□□ -1.83
CHD1O14646 AL359821.1-201ENST00000605519 182 ntBASIC3.63□□□□□ -1.83
CHD1O14646 AC067747.1-201ENST00000608026 250 ntBASIC3.63□□□□□ -1.83
CHD1O14646 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHD1O14646 ZNF542P-204ENST00000482727 1305 ntBASIC3.63□□□□□ -1.83
CHD1O14646 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHD1O14646 MIR148B-201ENST00000362252 99 ntBASIC3.62□□□□□ -1.83
CHD1O14646 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHD1O14646 MIR221-201ENST00000385135 110 ntBASIC3.62□□□□□ -1.83
CHD1O14646 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.62□□□□□ -1.83
CHD1O14646 AL353729.1-201ENST00000425044 720 ntBASIC3.62□□□□□ -1.83
CHD1O14646 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.62□□□□□ -1.83
CHD1O14646 RN7SL297P-201ENST00000483161 293 ntBASIC3.62□□□□□ -1.83
CHD1O14646 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.62□□□□□ -1.83
CHD1O14646 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.62□□□□□ -1.83
CHD1O14646 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.62□□□□□ -1.83
CHD1O14646 AC025281.1-201ENST00000567026 265 ntBASIC3.62□□□□□ -1.83
CHD1O14646 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.62□□□□□ -1.83
CHD1O14646 SNORD6-201ENST00000365444 73 ntBASIC3.61□□□□□ -1.83
CHD1O14646 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.61□□□□□ -1.83
CHD1O14646 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.61□□□□□ -1.83
CHD1O14646 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.61□□□□□ -1.83
CHD1O14646 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.61□□□□□ -1.83
CHD1O14646 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.61□□□□□ -1.83
CHD1O14646 MIR3186-201ENST00000577404 85 ntBASIC3.61□□□□□ -1.83
CHD1O14646 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.61□□□□□ -1.83
CHD1O14646 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CHD1O14646 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CHD1O14646 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CHD1O14646 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
CHD1O14646 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHD1O14646 SNORA25.9-201ENST00000365087 128 ntBASIC3.61□□□□□ -1.83
CHD1O14646 SNORA11.4-201ENST00000408823 129 ntBASIC3.61□□□□□ -1.83
CHD1O14646 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.61□□□□□ -1.83
CHD1O14646 AC092427.1-202ENST00000430569 476 ntBASIC3.61□□□□□ -1.83
CHD1O14646 RPL23AP62-201ENST00000463396 453 ntBASIC3.61□□□□□ -1.83
CHD1O14646 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.61□□□□□ -1.83
CHD1O14646 AC123904.3-201ENST00000547218 814 ntBASIC3.61□□□□□ -1.83
CHD1O14646 AL109809.4-201ENST00000603520 2185 ntBASIC3.6□□□□□ -1.83
CHD1O14646 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHD1O14646 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CHD1O14646 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHD1O14646 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.6□□□□□ -1.83
CHD1O14646 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CHD1O14646 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.6□□□□□ -1.83
CHD1O14646 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.6□□□□□ -1.83
CHD1O14646 RPS15AP28-201ENST00000435088 386 ntBASIC3.6□□□□□ -1.83
CHD1O14646 RPL38P4-201ENST00000502376 214 ntBASIC3.6□□□□□ -1.83
CHD1O14646 SCARNA16.3-201ENST00000516595 184 ntBASIC3.6□□□□□ -1.83
CHD1O14646 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.6□□□□□ -1.83
CHD1O14646 AC091834.1-201ENST00000614543 472 ntBASIC3.6□□□□□ -1.83
CHD1O14646 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.6□□□□□ -1.83
CHD1O14646 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.6□□□□□ -1.83
CHD1O14646 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHD1O14646 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHD1O14646 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHD1O14646 NDUFS5P3-201ENST00000450668 321 ntBASIC3.59□□□□□ -1.83
CHD1O14646 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.59□□□□□ -1.83
CHD1O14646 RN7SKP96-201ENST00000516948 297 ntBASIC3.59□□□□□ -1.83
CHD1O14646 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.59□□□□□ -1.83
CHD1O14646 AC012182.1-201ENST00000570133 895 ntBASIC3.59□□□□□ -1.83
CHD1O14646 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.59□□□□□ -1.83
CHD1O14646 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CHD1O14646 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms