Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 RNA5SP281-201ENST00000516504 135 ntBASIC2.06□□□□□ -2.08
HMGN4O00479 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.06□□□□□ -2.08
HMGN4O00479 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.06□□□□□ -2.08
HMGN4O00479 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.06□□□□□ -2.08
HMGN4O00479 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.06□□□□□ -2.08
HMGN4O00479 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.06□□□□□ -2.08
HMGN4O00479 DNAJC19P3-201ENST00000594491 331 ntBASIC2.06□□□□□ -2.08
HMGN4O00479 AC026790.2-201ENST00000606282 430 ntBASIC2.06□□□□□ -2.08
HMGN4O00479 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HMGN4O00479 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
HMGN4O00479 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HMGN4O00479 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
HMGN4O00479 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HMGN4O00479 METTL21EP-201ENST00000298105 713 ntBASIC2.05□□□□□ -2.08
HMGN4O00479 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
HMGN4O00479 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HMGN4O00479 HSFY1P1-201ENST00000423928 1178 ntBASIC2.05□□□□□ -2.08
HMGN4O00479 AC092427.1-202ENST00000430569 476 ntBASIC2.05□□□□□ -2.08
HMGN4O00479 Z99127.2-201ENST00000441426 334 ntBASIC2.05□□□□□ -2.08
HMGN4O00479 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.05□□□□□ -2.08
HMGN4O00479 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.05□□□□□ -2.08
HMGN4O00479 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGN4O00479 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGN4O00479 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGN4O00479 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HMGN4O00479 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGN4O00479 AC093014.1-201ENST00000548926 724 ntBASIC2.05□□□□□ -2.08
HMGN4O00479 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.05□□□□□ -2.08
HMGN4O00479 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.05□□□□□ -2.08
HMGN4O00479 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGN4O00479 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.05□□□□□ -2.08
HMGN4O00479 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGN4O00479 AL160281.1-201ENST00000605307 311 ntBASIC2.05□□□□□ -2.08
HMGN4O00479 AC107294.1-201ENST00000609524 467 ntBASIC2.05□□□□□ -2.08
HMGN4O00479 AC096586.2-201ENST00000610260 441 ntBASIC2.05□□□□□ -2.08
HMGN4O00479 AC121761.2-201ENST00000617300 689 ntBASIC2.05□□□□□ -2.08
HMGN4O00479 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.05□□□□□ -2.08
HMGN4O00479 AC093591.3-201ENST00000634516 308 ntBASIC2.05□□□□□ -2.08
HMGN4O00479 MTND4P34-201ENST00000572715 1371 ntBASIC2.05□□□□□ -2.08
HMGN4O00479 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HMGN4O00479 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HMGN4O00479 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.05□□□□□ -2.08
HMGN4O00479 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.05□□□□□ -2.08
HMGN4O00479 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HMGN4O00479 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HMGN4O00479 MIR153-1-201ENST00000384914 90 ntBASIC2.04□□□□□ -2.08
HMGN4O00479 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HMGN4O00479 AC006020.1-201ENST00000420179 1854 ntBASIC2.04□□□□□ -2.08
HMGN4O00479 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.04□□□□□ -2.08
HMGN4O00479 HMGB1P12-201ENST00000438594 598 ntBASIC2.04□□□□□ -2.08
HMGN4O00479 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.04□□□□□ -2.08
HMGN4O00479 HMGN2P16-201ENST00000456802 261 ntBASIC2.04□□□□□ -2.08
HMGN4O00479 RPL31P50-201ENST00000471002 296 ntBASIC2.04□□□□□ -2.08
HMGN4O00479 RNA5SP200-201ENST00000516360 103 ntBASIC2.04□□□□□ -2.08
HMGN4O00479 AP003122.3-201ENST00000526316 255 ntBASIC2.04□□□□□ -2.08
HMGN4O00479 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.04□□□□□ -2.08
HMGN4O00479 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.04□□□□□ -2.08
HMGN4O00479 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.04□□□□□ -2.08
HMGN4O00479 AC009097.3-201ENST00000563557 1018 ntBASIC2.04□□□□□ -2.08
HMGN4O00479 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.04□□□□□ -2.08
HMGN4O00479 AC103810.1-201ENST00000579873 453 ntBASIC2.04□□□□□ -2.08
HMGN4O00479 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HMGN4O00479 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HMGN4O00479 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HMGN4O00479 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HMGN4O00479 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
HMGN4O00479 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.03□□□□□ -2.08
HMGN4O00479 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.03□□□□□ -2.08
HMGN4O00479 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
HMGN4O00479 SNORA48.3-201ENST00000391081 134 ntBASIC2.03□□□□□ -2.08
HMGN4O00479 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HMGN4O00479 USP9YP27-201ENST00000418455 438 ntBASIC2.03□□□□□ -2.08
HMGN4O00479 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
HMGN4O00479 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HMGN4O00479 AC093392.2-201ENST00000450682 337 ntBASIC2.03□□□□□ -2.08
HMGN4O00479 AL445669.2-201ENST00000454425 421 ntBASIC2.03□□□□□ -2.08
HMGN4O00479 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.03□□□□□ -2.08
HMGN4O00479 RPL23AP49-201ENST00000492925 468 ntBASIC2.03□□□□□ -2.08
HMGN4O00479 DSTNP2-201ENST00000504533 515 ntBASIC2.03□□□□□ -2.08
HMGN4O00479 RN7SKP82-201ENST00000516786 223 ntBASIC2.03□□□□□ -2.08
HMGN4O00479 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.03□□□□□ -2.08
HMGN4O00479 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.03□□□□□ -2.08
HMGN4O00479 LRRC37A5P-203ENST00000580181 585 ntBASIC2.03□□□□□ -2.08
HMGN4O00479 MIR5002-201ENST00000584713 97 ntBASIC2.03□□□□□ -2.08
HMGN4O00479 AC007938.3-201ENST00000604965 623 ntBASIC2.03□□□□□ -2.08
HMGN4O00479 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.03□□□□□ -2.08
HMGN4O00479 AC231759.1-201ENST00000616455 597 ntBASIC2.03□□□□□ -2.08
HMGN4O00479 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.03□□□□□ -2.08
HMGN4O00479 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
HMGN4O00479 CKAP2P1-201ENST00000555477 2049 ntBASIC2.03□□□□□ -2.08
HMGN4O00479 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.03□□□□□ -2.09
HMGN4O00479 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMGN4O00479 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HMGN4O00479 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
HMGN4O00479 AC080100.1-201ENST00000624239 5356 ntBASIC2.02□□□□□ -2.09
HMGN4O00479 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMGN4O00479 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
HMGN4O00479 MIR607-201ENST00000385241 96 ntBASIC2.02□□□□□ -2.09
HMGN4O00479 AL034374.1-201ENST00000406329 351 ntBASIC2.02□□□□□ -2.09
HMGN4O00479 AC005005.2-201ENST00000420779 380 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms