Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 Y_RNA.88-201ENST00000363029 99 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 RNU5E-8P-201ENST00000363502 116 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 RNU6-278P-201ENST00000390945 109 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 RNU2-62P-201ENST00000410868 191 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 JKAMPP1-201ENST00000413804 919 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 OR2AH1P-201ENST00000425717 928 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 GPR143P-201ENST00000434155 205 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 HMGB1P31-201ENST00000437242 427 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 RPS15AP9-201ENST00000439856 381 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL356981.1-201ENST00000454879 684 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 RNU7-59P-201ENST00000459101 61 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL049714.1-201ENST00000466686 347 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 RPS29P22-201ENST00000472363 168 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 RPS3AP50-201ENST00000487064 803 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC069439.1-201ENST00000494739 167 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 RN7SL558P-201ENST00000497468 299 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 ENPP7P9-201ENST00000514456 627 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 RNU1-6P-201ENST00000516290 144 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 SCARNA24.1-201ENST00000516465 137 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 RPL23AP53-201ENST00000521854 457 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL512310.1-201ENST00000548639 172 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 HMGB3P26-201ENST00000560051 582 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 HMGB2P1-201ENST00000591146 634 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC025449.1-201ENST00000603896 529 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 MIR6853-201ENST00000619642 74 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL136313.1-201ENST00000624804 202 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC019226.1-201ENST00000625666 515 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 MIR1321-201ENST00000637766 79 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC244517.1-201ENST00000606030 2086 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 FAM91A3P-201ENST00000456826 2544 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC012618.3-205ENST00000637896 1496 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC026951.1-201ENST00000559530 2459 ntBASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
IGHV4-28A0A0C4DH34 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 Z73965.1-201ENST00000623412 2297 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC010300.1-201ENST00000600671 5134 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL590240.1-201ENST00000334118 313 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 Y_RNA.89-201ENST00000363031 102 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 Y_RNA.295-201ENST00000364918 102 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 RNU6-108P-201ENST00000365558 107 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 RNU1-39P-201ENST00000383897 165 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 RNU6-637P-201ENST00000384050 107 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 RNU6-432P-201ENST00000384196 109 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 RPS16P5-201ENST00000406501 404 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL603766.1-201ENST00000407763 664 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 RNU2-9P-201ENST00000410194 145 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 RSU1P3-201ENST00000412878 835 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL807761.1-201ENST00000417622 171 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL137014.1-201ENST00000420490 1226 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL451139.1-201ENST00000434718 346 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC005154.2-201ENST00000438110 379 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC016831.4-201ENST00000438302 307 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 RPL7P54-201ENST00000438336 674 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AL031584.1-201ENST00000447169 754 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC073264.2-201ENST00000448886 166 ntBASIC3.45□□□□□ -1.86
IGHV4-28A0A0C4DH34 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms