Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 HIST1H3PS1-201ENST00000404612 417 ntBASIC8.01□□□□□ -1.13
CCDC61Q9Y6R9 MTND3P9-201ENST00000429526 346 ntBASIC8.01□□□□□ -1.13
CCDC61Q9Y6R9 AL591043.1-201ENST00000432461 424 ntBASIC8.01□□□□□ -1.13
CCDC61Q9Y6R9 MTCO1P5-201ENST00000433573 344 ntBASIC8.01□□□□□ -1.13
CCDC61Q9Y6R9 SSXP4-201ENST00000451349 245 ntBASIC8.01□□□□□ -1.13
CCDC61Q9Y6R9 RN7SL432P-201ENST00000484057 298 ntBASIC8.01□□□□□ -1.13
CCDC61Q9Y6R9 PDCD5P2-201ENST00000507570 312 ntBASIC8.01□□□□□ -1.13
CCDC61Q9Y6R9 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC8.01□□□□□ -1.13
CCDC61Q9Y6R9 CLMN-206ENST00000556441 452 ntTSL 5 BASIC8.01□□□□□ -1.13
CCDC61Q9Y6R9 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC8.01□□□□□ -1.13
CCDC61Q9Y6R9 AL160281.1-201ENST00000605307 311 ntBASIC8.01□□□□□ -1.13
CCDC61Q9Y6R9 AC211433.2-201ENST00000608433 387 ntBASIC8.01□□□□□ -1.13
CCDC61Q9Y6R9 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC8.01□□□□□ -1.13
CCDC61Q9Y6R9 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC8.01□□□□□ -1.13
CCDC61Q9Y6R9 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
CCDC61Q9Y6R9 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC8.01□□□□□ -1.13
CCDC61Q9Y6R9 AL121768.1-201ENST00000613917 2544 ntBASIC8.01□□□□□ -1.13
CCDC61Q9Y6R9 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 AC022819.1-201ENST00000563495 3910 ntBASIC8□□□□□ -1.13
CCDC61Q9Y6R9 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 GTF2IP4-201ENST00000453092 2054 ntBASIC8□□□□□ -1.13
CCDC61Q9Y6R9 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 U3.13-201ENST00000364804 214 ntBASIC8□□□□□ -1.13
CCDC61Q9Y6R9 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 DPPA2P3-201ENST00000411853 655 ntBASIC8□□□□□ -1.13
CCDC61Q9Y6R9 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 AC005094.1-201ENST00000440420 368 ntBASIC8□□□□□ -1.13
CCDC61Q9Y6R9 AL162739.1-201ENST00000450606 307 ntBASIC8□□□□□ -1.13
CCDC61Q9Y6R9 FPGT-203ENST00000467578 601 ntTSL 2 BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 RPS27AP1-201ENST00000475545 471 ntBASIC8□□□□□ -1.13
CCDC61Q9Y6R9 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 RNU5F-8P-201ENST00000515941 111 ntBASIC8□□□□□ -1.13
CCDC61Q9Y6R9 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 AL022394.1-201ENST00000606979 292 ntBASIC8□□□□□ -1.13
CCDC61Q9Y6R9 AC243829.7-201ENST00000633081 225 ntBASIC8□□□□□ -1.13
CCDC61Q9Y6R9 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 AL592148.3-201ENST00000608771 2646 ntBASIC8□□□□□ -1.13
CCDC61Q9Y6R9 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 AC078880.4-201ENST00000617627 1749 ntBASIC8□□□□□ -1.13
CCDC61Q9Y6R9 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC8□□□□□ -1.13
CCDC61Q9Y6R9 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 AC007785.2-201ENST00000598627 1916 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 AL161756.3-201ENST00000641216 2071 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 SNORD113-8-201ENST00000363497 74 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 Y_RNA.261-201ENST00000364631 102 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 RNU6-290P-201ENST00000365212 101 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 Y_RNA.400-201ENST00000383963 111 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 MTCYBP2-201ENST00000407745 171 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 RNU2-52P-201ENST00000410680 190 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 AL030996.1-201ENST00000411430 235 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 RPL23AP38-201ENST00000423801 469 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 SNORD121B-201ENST00000458838 81 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 PLGLA-201ENST00000465668 449 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 RN7SL727P-201ENST00000482164 296 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 UBA52P7-201ENST00000486088 380 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 RPL30P1-201ENST00000488676 339 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 AC069113.1-201ENST00000517763 267 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 AC096996.1-201ENST00000563813 325 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 MIR4293-201ENST00000584305 78 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 AC011487.3-201ENST00000593607 453 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 FKBP1AP1-201ENST00000594588 318 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 AL670379.6-201ENST00000603753 252 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 AL670379.1-201ENST00000604752 252 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 AL670379.5-201ENST00000605253 252 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 AL670379.8-201ENST00000605353 252 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 AL158032.1-201ENST00000605401 106 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 AL121917.1-203ENST00000605534 577 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 AL670379.7-201ENST00000605823 252 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 uc_338.9-201ENST00000617424 182 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms