Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AC025016.1-201ENST00000616746 682 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 AC006963.1-201ENST00000624003 1052 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 AC020923.1-201ENST00000624021 917 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 AC083865.1-201ENST00000636634 831 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 MIR22-201ENST00000362190 85 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 Y_RNA.493-201ENST00000384422 102 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 MIR483-201ENST00000385070 76 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 RNU6-837P-201ENST00000391056 108 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AL591034.1-201ENST00000407447 340 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 RNU4-78P-201ENST00000410940 126 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 RNU6-272P-201ENST00000411028 104 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 RNA5SP492-201ENST00000411330 114 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 ZNF965P-201ENST00000432501 817 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 RPS26P56-201ENST00000444468 240 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 RPS24P6-201ENST00000452670 400 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 snoU13.3-201ENST00000459441 104 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 RNF138P1-201ENST00000502765 546 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 RNU6-202P-201ENST00000515998 96 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 SNORA31.20-201ENST00000517111 133 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AC004486.1-201ENST00000546846 233 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 CR383656.14-201ENST00000551951 406 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AL355836.1-201ENST00000555951 870 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 NCAPGP2-201ENST00000557911 754 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AC027104.1-201ENST00000563702 681 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AL161756.2-201ENST00000604597 246 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AL355802.4-201ENST00000607635 548 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AC091953.5-201ENST00000622919 233 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 AL109659.3-201ENST00000624985 950 ntBASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
USH1CQ9Y6N9 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 ENSAP3-201ENST00000312710 333 ntBASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 MRPL50P2-201ENST00000416821 482 ntBASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 HSPE1P1-201ENST00000421494 318 ntBASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 AL158156.1-201ENST00000422509 473 ntBASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 AL590623.1-201ENST00000427864 105 ntBASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 AP000705.1-201ENST00000454567 350 ntBASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 RN7SL601P-201ENST00000471221 293 ntBASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 MTND5P4-201ENST00000514978 288 ntBASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 AC019227.1-201ENST00000526902 510 ntBASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 AC004775.1-201ENST00000607389 753 ntBASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 AC068831.7-201ENST00000616954 363 ntBASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 AL356118.1-201ENST00000635272 1078 ntBASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 AL590396.2-201ENST00000636511 1041 ntBASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
USH1CQ9Y6N9 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
USH1CQ9Y6N9 MAPK10-266ENST00000641066 6555 ntBASIC2.84□□□□□ -1.95
USH1CQ9Y6N9 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
USH1CQ9Y6N9 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
USH1CQ9Y6N9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.84□□□□□ -1.95
USH1CQ9Y6N9 RNU6-525P-201ENST00000363685 104 ntBASIC2.84□□□□□ -1.95
USH1CQ9Y6N9 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.84□□□□□ -1.95
USH1CQ9Y6N9 RNVU1-14-201ENST00000384770 164 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms