Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 U3.2-201ENST00000362981 210 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 RNU6-522P-201ENST00000364497 107 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 RNU1-136P-201ENST00000384181 164 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 SNORD51-201ENST00000384320 80 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 RNU6-831P-201ENST00000384548 107 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 CTSL3P-202ENST00000412179 788 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 NDUFB4P5-201ENST00000415445 361 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 RPS7P15-201ENST00000415804 584 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 CHEK2P3-201ENST00000416118 248 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 AL161631.1-201ENST00000417933 486 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 HSPE1P1-201ENST00000421494 318 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 AC016696.1-201ENST00000446949 318 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 RPS3AP41-201ENST00000462701 778 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 AC068305.1-201ENST00000497406 726 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 FAM206BP-201ENST00000510179 541 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 TTC39CP1-201ENST00000512513 755 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 RN7SKP13-201ENST00000515933 244 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 Y_RNA.665-201ENST00000516177 98 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 RN7SKP147-201ENST00000517154 244 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 IGLVIV-53-201ENST00000520107 367 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 AL162730.1-201ENST00000605734 292 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 AL022345.1-201ENST00000607292 135 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 AC025574.2-201ENST00000615621 514 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 AC091925.2-201ENST00000625059 256 ntBASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CDC42EP3Q9UKI2 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 AL360270.2-201ENST00000562952 5985 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 MIR133B-201ENST00000362210 119 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 RNU6-552P-201ENST00000362869 119 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 Y_RNA.387-201ENST00000383918 102 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 RNA5SP91-201ENST00000390902 119 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 RNU6-278P-201ENST00000390945 109 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 SNORA11-201ENST00000408789 128 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 RNU4-26P-201ENST00000410270 107 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 RNU2-29P-201ENST00000410423 189 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 OR1AA1P-201ENST00000419597 916 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 RPL23AP38-201ENST00000423801 469 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 AL353729.1-201ENST00000425044 720 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 AC009963.2-201ENST00000453431 138 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 AC004129.2-201ENST00000457229 287 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 RN7SL481P-201ENST00000477764 299 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 RN7SL346P-201ENST00000491561 294 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 RPS15AP36-201ENST00000492022 382 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 AC116562.3-201ENST00000506136 177 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 AC092436.1-201ENST00000506450 503 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 KLHL2P1-201ENST00000508691 521 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 MTCO3P44-201ENST00000510977 541 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 AC017037.2-201ENST00000513850 890 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 RN7SKP116-201ENST00000516902 319 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 IGLV3-24-201ENST00000517477 197 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 NARSP2-201ENST00000518524 679 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 RAB9BP1-201ENST00000519581 626 ntBASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.48□□□□□ -1.69
CDC42EP3Q9UKI2 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms