Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 AL122126.1-201ENST00000546905 1318 ntBASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 MTND5P19-201ENST00000424872 1794 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AC006484.1-201ENST00000435086 1884 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AL442639.1-201ENST00000625030 1899 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 Y_RNA.482-201ENST00000384377 111 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 MIR105-2-201ENST00000385083 81 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 RPL21P67-201ENST00000402896 478 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AL121834.1-202ENST00000404494 277 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 OR6E1P-201ENST00000414424 923 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 RPL6P29-201ENST00000414863 865 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 Z93019.1-201ENST00000416450 973 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AL355433.1-201ENST00000422804 300 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AC005019.1-201ENST00000436455 431 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AC243772.1-201ENST00000451620 410 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 RNU6-976P-201ENST00000516086 111 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 RNU6-256P-201ENST00000516747 97 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 RNU6-794P-201ENST00000517261 64 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 RN7SKP295-201ENST00000517264 153 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AC090136.1-201ENST00000520009 240 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AL137161.1-201ENST00000532231 390 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AC069061.3-201ENST00000582254 823 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AL355598.1-201ENST00000604169 202 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AL162431.4-201ENST00000604674 411 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AC007938.3-201ENST00000604965 623 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AC083806.3-201ENST00000614016 455 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AP001486.3-201ENST00000615334 372 ntBASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.65□□□□□ -1.5
SALL4Q9UJQ4 AL137141.1-201ENST00000624622 4836 ntBASIC5.65□□□□□ -1.51
SALL4Q9UJQ4 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SALL4Q9UJQ4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SALL4Q9UJQ4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SALL4Q9UJQ4 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.65□□□□□ -1.51
SALL4Q9UJQ4 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.65□□□□□ -1.51
SALL4Q9UJQ4 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SALL4Q9UJQ4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
SALL4Q9UJQ4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SALL4Q9UJQ4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.65□□□□□ -1.51
SALL4Q9UJQ4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.65□□□□□ -1.51
SALL4Q9UJQ4 Z95327.2-201ENST00000414579 1873 ntBASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 RNU1-19P-201ENST00000363306 165 ntBASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 RNU6-1318P-201ENST00000365389 103 ntBASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 AL136372.1-201ENST00000403060 228 ntBASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 AL591848.1-201ENST00000413092 322 ntBASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 MTCYBP9-201ENST00000431021 303 ntBASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 RPL36AP6-201ENST00000435770 321 ntBASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 RPL7AP61-201ENST00000443410 636 ntBASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 RPS24P16-201ENST00000497294 392 ntBASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 COX7A2P2-201ENST00000505291 250 ntBASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 AC017037.2-201ENST00000513850 890 ntBASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 RNU6-798P-201ENST00000516912 103 ntBASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 RNU6-1137P-201ENST00000517073 99 ntBASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 FAM60DP-201ENST00000524174 632 ntBASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 AC092470.1-201ENST00000546187 132 ntBASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.64□□□□□ -1.51
SALL4Q9UJQ4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms