Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL136133.1-201ENST00000413694 376 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 MTND4P3-201ENST00000417829 541 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 BOLA3P4-201ENST00000418151 400 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 AL513174.1-201ENST00000423182 629 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 AL138799.3-201ENST00000438968 350 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 AL034418.1-201ENST00000448675 860 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 AC109925.1-201ENST00000478069 331 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 VPS26AP1-201ENST00000483197 979 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 NCOR1P1-202ENST00000486162 291 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 RN7SL504P-201ENST00000494496 287 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 AC084024.2-201ENST00000503480 791 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 DSTNP2-201ENST00000504533 515 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 BNIP3P27-201ENST00000599991 412 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 AL445435.1-201ENST00000604232 665 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 DPRXP5-201ENST00000604662 539 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 AC073387.2-201ENST00000604797 784 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 AC090116.1-201ENST00000615679 446 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 AP001002.2-201ENST00000625137 386 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 SNORA31-201ENST00000362607 130 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 RNU6-492P-201ENST00000363035 104 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 RNA5SP189-201ENST00000364920 115 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 RNU6-339P-201ENST00000384310 107 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 Y_RNA.493-201ENST00000384422 102 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 MIR23A-201ENST00000385245 73 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AL079342.2-201ENST00000403367 482 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AL356968.1-201ENST00000416622 474 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 DPRXP1-201ENST00000426312 460 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 RPL31P54-201ENST00000429803 370 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 CYCSP32-201ENST00000440548 321 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 NPM1P49-201ENST00000448027 714 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 snoU13.3-201ENST00000459441 104 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 RPL5P24-201ENST00000463742 885 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 OR5H5P-201ENST00000503164 928 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 MTCYBP37-201ENST00000510642 1133 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 MTCO3P44-201ENST00000510977 541 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 RNU2-58P-201ENST00000516403 183 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AC118942.1-201ENST00000529674 1035 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 YWHAZP1-201ENST00000556286 722 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 SULT1C2P1-202ENST00000562418 459 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AL845331.3-202ENST00000562856 261 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 MIR5708-201ENST00000579723 85 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 MIR3908-201ENST00000579798 126 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 MIR4425-201ENST00000580572 84 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AL669831.4-202ENST00000590817 238 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 SNRPGP15-201ENST00000600149 222 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AL606834.3-201ENST00000602615 496 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 AL450489.1-201ENST00000612071 468 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 MFSD8-245ENST00000641743 948 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 ZNF542P-204ENST00000482727 1305 ntBASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.92□□□□□ -1.94
CLCF1Q9UBD9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms