Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 HMGB1P31-201ENST00000437242 427 ntBASIC4.31□□□□□ -1.72
RLIMQ9NVW2 RPL23AP33-201ENST00000442301 452 ntBASIC4.31□□□□□ -1.72
RLIMQ9NVW2 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.31□□□□□ -1.72
RLIMQ9NVW2 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.31□□□□□ -1.72
RLIMQ9NVW2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.31□□□□□ -1.72
RLIMQ9NVW2 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.31□□□□□ -1.72
RLIMQ9NVW2 SNORD121B-201ENST00000458838 81 ntBASIC4.31□□□□□ -1.72
RLIMQ9NVW2 AC069439.1-201ENST00000494739 167 ntBASIC4.31□□□□□ -1.72
RLIMQ9NVW2 RN7SL591P-201ENST00000496150 292 ntBASIC4.31□□□□□ -1.72
RLIMQ9NVW2 SCARNA22-201ENST00000503991 125 ntBASIC4.31□□□□□ -1.72
RLIMQ9NVW2 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.31□□□□□ -1.72
RLIMQ9NVW2 AC021146.1-201ENST00000511202 716 ntBASIC4.31□□□□□ -1.72
RLIMQ9NVW2 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.31□□□□□ -1.72
RLIMQ9NVW2 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.31□□□□□ -1.72
RLIMQ9NVW2 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.31□□□□□ -1.72
RLIMQ9NVW2 AL133271.1-201ENST00000538229 291 ntBASIC4.31□□□□□ -1.72
RLIMQ9NVW2 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.31□□□□□ -1.72
RLIMQ9NVW2 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.31□□□□□ -1.72
RLIMQ9NVW2 COX6CP3-201ENST00000580869 223 ntBASIC4.31□□□□□ -1.72
RLIMQ9NVW2 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.31□□□□□ -1.72
RLIMQ9NVW2 SLC25A36P1-201ENST00000590111 465 ntBASIC4.31□□□□□ -1.72
RLIMQ9NVW2 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.31□□□□□ -1.72
RLIMQ9NVW2 KC877982.1-201ENST00000602313 470 ntBASIC4.31□□□□□ -1.72
RLIMQ9NVW2 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.31□□□□□ -1.72
RLIMQ9NVW2 AC068790.5-201ENST00000602741 355 ntBASIC4.31□□□□□ -1.72
RLIMQ9NVW2 AC007038.2-201ENST00000608095 740 ntBASIC4.31□□□□□ -1.72
RLIMQ9NVW2 OR6R2P-201ENST00000609216 300 ntBASIC4.31□□□□□ -1.72
RLIMQ9NVW2 AC099669.2-201ENST00000616549 437 ntBASIC4.31□□□□□ -1.72
RLIMQ9NVW2 AC090510.2-201ENST00000617465 629 ntBASIC4.31□□□□□ -1.72
RLIMQ9NVW2 AC002550.2-201ENST00000621246 394 ntBASIC4.31□□□□□ -1.72
RLIMQ9NVW2 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.31□□□□□ -1.72
RLIMQ9NVW2 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RLIMQ9NVW2 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
RLIMQ9NVW2 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
RLIMQ9NVW2 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RLIMQ9NVW2 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.31□□□□□ -1.72
RLIMQ9NVW2 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RLIMQ9NVW2 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RLIMQ9NVW2 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 Y_RNA.88-201ENST00000363029 99 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 RNU5A-8P-201ENST00000364102 114 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 RNU6-1078P-201ENST00000364522 103 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 Y_RNA.295-201ENST00000364918 102 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 RNU6-483P-201ENST00000384088 108 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 Y_RNA.573-201ENST00000384763 105 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 MIR19A-201ENST00000384878 82 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AC068050.1-201ENST00000394891 380 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 RNA5SP56-201ENST00000410277 118 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 RNA5SP146-201ENST00000410743 123 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 RPL23AP30-201ENST00000432419 501 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 NEK4P1-201ENST00000433383 879 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 RPL7P54-201ENST00000438336 674 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 VN1R34P-201ENST00000447387 883 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 DPPA3P1-201ENST00000448050 469 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 RPL29P29-201ENST00000448725 423 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 OR1H1P-201ENST00000448731 937 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AC063943.1-201ENST00000465434 453 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AK3P4-201ENST00000504283 583 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AC114797.1-201ENST00000514003 728 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 Y_RNA.693-201ENST00000516641 110 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 BRD9P1-201ENST00000529855 560 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AP005205.1-201ENST00000563503 508 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AC025678.1-201ENST00000567861 338 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 RN7SL176P-201ENST00000580352 264 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 RPL12P25-202ENST00000598100 674 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AL031176.1-201ENST00000604554 466 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AC133644.2-201ENST00000608142 540 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AC105429.2-201ENST00000610567 517 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AC018445.2-201ENST00000622987 260 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 AC105074.1-201ENST00000623380 3095 ntBASIC4.3□□□□□ -1.72
RLIMQ9NVW2 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RLIMQ9NVW2 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms