Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
KLHL1Q9NR64 MTCO3P7-201ENST00000510008 774 ntBASIC3.83□□□□□ -1.8
KLHL1Q9NR64 MTCO3P44-201ENST00000510977 541 ntBASIC3.83□□□□□ -1.8
KLHL1Q9NR64 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.83□□□□□ -1.8
KLHL1Q9NR64 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KLHL1Q9NR64 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.83□□□□□ -1.8
KLHL1Q9NR64 AL389895.1-201ENST00000554127 252 ntBASIC3.83□□□□□ -1.8
KLHL1Q9NR64 AC073544.2-201ENST00000601155 540 ntBASIC3.83□□□□□ -1.8
KLHL1Q9NR64 MTCYBP22-201ENST00000603788 447 ntBASIC3.83□□□□□ -1.8
KLHL1Q9NR64 AL391497.1-201ENST00000608671 547 ntBASIC3.83□□□□□ -1.8
KLHL1Q9NR64 AP001521.1-201ENST00000609150 300 ntBASIC3.83□□□□□ -1.8
KLHL1Q9NR64 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.83□□□□□ -1.8
KLHL1Q9NR64 AL356266.1-201ENST00000623311 483 ntBASIC3.83□□□□□ -1.8
KLHL1Q9NR64 AC231657.1-201ENST00000624313 397 ntBASIC3.83□□□□□ -1.8
KLHL1Q9NR64 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
KLHL1Q9NR64 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.83□□□□□ -1.8
KLHL1Q9NR64 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KLHL1Q9NR64 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.83□□□□□ -1.8
KLHL1Q9NR64 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.83□□□□□ -1.8
KLHL1Q9NR64 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KLHL1Q9NR64 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
KLHL1Q9NR64 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 FAM91A3P-201ENST00000456826 2544 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AC090337.1-201ENST00000579651 2074 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 Y_RNA.194-201ENST00000363985 102 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 RNU6-660P-201ENST00000364566 109 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 SNORA48.7-201ENST00000391302 135 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 SNRPEP2-201ENST00000397592 279 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 RPL23AP39-201ENST00000415533 405 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 Z99497.1-201ENST00000421282 135 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AC096638.2-201ENST00000434965 711 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AL356276.2-201ENST00000435919 558 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AC092427.1-201ENST00000439177 601 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 RPS29P7-201ENST00000439662 171 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 RPL26P28-201ENST00000451325 435 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 MTCO2P18-201ENST00000457151 658 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 ARPC3P2-201ENST00000457786 533 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AC022034.3-201ENST00000471393 478 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 PPIAP15-201ENST00000479662 484 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 KLRA1P-201ENST00000503499 986 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 MTND3P5-201ENST00000512798 333 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AC108064.1-201ENST00000513791 460 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 RNU6-583P-201ENST00000516012 92 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 RNA5SP309-201ENST00000516670 106 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AC023632.4-201ENST00000517783 191 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 MED28P5-201ENST00000528254 438 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AC034105.4-201ENST00000568304 277 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AC093227.2-201ENST00000589357 285 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 RSL24D1P11-201ENST00000591045 491 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AC119751.7-201ENST00000600494 245 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AC069304.2-201ENST00000605154 435 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 HMGB1P50-201ENST00000605814 607 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AC092354.1-201ENST00000606057 376 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 AC090582.1-201ENST00000636321 199 ntBASIC3.82□□□□□ -1.8
KLHL1Q9NR64 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KLHL1Q9NR64 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.81□□□□□ -1.8
KLHL1Q9NR64 MTND5P24-201ENST00000438892 1767 ntBASIC3.81□□□□□ -1.8
KLHL1Q9NR64 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
KLHL1Q9NR64 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.81□□□□□ -1.8
KLHL1Q9NR64 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KLHL1Q9NR64 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KLHL1Q9NR64 DDX43P2-201ENST00000604753 1354 ntBASIC3.81□□□□□ -1.8
KLHL1Q9NR64 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
KLHL1Q9NR64 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KLHL1Q9NR64 U3.4-201ENST00000363352 213 ntBASIC3.81□□□□□ -1.8
KLHL1Q9NR64 RNA5SP88-201ENST00000365560 109 ntBASIC3.81□□□□□ -1.8
KLHL1Q9NR64 AL359837.1-201ENST00000381357 287 ntBASIC3.81□□□□□ -1.8
KLHL1Q9NR64 MT-TC-201ENST00000387405 66 ntBASIC3.81□□□□□ -1.8
KLHL1Q9NR64 RPL32P23-201ENST00000397237 405 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms