Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AL445669.2-201ENST00000454425 421 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 RNU6-27P-201ENST00000516146 107 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 RNU1-143P-201ENST00000516296 146 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 SNORD59.2-201ENST00000516873 68 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 SCARNA20.6-201ENST00000517251 106 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 OR4T1P-201ENST00000554933 911 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 FAM60BP-201ENST00000578364 658 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 AL133393.1-201ENST00000603277 287 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 AL162713.1-201ENST00000604480 262 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 AL159169.3-201ENST00000608871 561 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 U1.23-201ENST00000610293 146 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 RNU1-68P-201ENST00000615382 146 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 AC002076.2-201ENST00000617362 122 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 U1.39-201ENST00000621562 146 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 AC006111.3-201ENST00000622137 383 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 AL512506.2-201ENST00000624472 458 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 AC090897.3-201ENST00000636973 1157 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 RNA5SP119-201ENST00000362715 117 ntBASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 MIR490-201ENST00000384865 128 ntBASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 HMGN1P24-201ENST00000412282 298 ntBASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 AL136133.1-201ENST00000413694 376 ntBASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 RPL32P35-201ENST00000415214 394 ntBASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 RPL21P32-201ENST00000419877 477 ntBASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 RPL21P40-201ENST00000428586 483 ntBASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 MTND4LP10-201ENST00000435146 291 ntBASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 AC241584.1-201ENST00000438469 1241 ntBASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 TRIM60P18-201ENST00000441518 828 ntBASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 AC140076.1-201ENST00000449897 361 ntBASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 BTF3P5-201ENST00000457252 467 ntBASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 KCTD9P5-201ENST00000504141 1170 ntBASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 RN7SKP157-201ENST00000516174 282 ntBASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 AC068657.1-201ENST00000520807 306 ntBASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 HIGD1AP1-201ENST00000550979 275 ntBASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 SULT1C2P1-202ENST00000562418 459 ntBASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 AC005951.1-201ENST00000576706 485 ntBASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 AL591516.1-201ENST00000611326 274 ntBASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 AC091903.1-201ENST00000624322 454 ntBASIC3.29□□□□□ -1.88
LRRC40Q9H9A6 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 OR6K3-202ENST00000368146 996 ntBASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 RPS3AP26-201ENST00000398259 784 ntBASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 CYCSP45-201ENST00000402289 315 ntBASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 RNU6-575P-201ENST00000411326 105 ntBASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 AL645638.1-201ENST00000440519 361 ntBASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 AL592437.1-201ENST00000443781 492 ntBASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 CDC27P1-201ENST00000445384 715 ntBASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 CYCSP35-201ENST00000451978 304 ntBASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 RPL21P10-201ENST00000463521 490 ntBASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 RN7SL293P-201ENST00000481765 281 ntBASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 AC092185.1-201ENST00000491371 97 ntBASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 AC021678.1-201ENST00000505195 936 ntBASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 AC006390.1-201ENST00000508068 283 ntBASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 AC026412.2-201ENST00000512270 1075 ntBASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 AC011611.1-201ENST00000552179 197 ntBASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms