Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 UBE2NP1-201ENST00000545592 458 ntBASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 AL389895.1-201ENST00000554127 252 ntBASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 AL450489.1-201ENST00000612071 468 ntBASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 AC091903.1-201ENST00000624322 454 ntBASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CCSER1Q9C0I3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 AC073346.2-201ENST00000624724 2058 ntBASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 RNU6-821P-201ENST00000390995 107 ntBASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 RPL22P22-201ENST00000395439 379 ntBASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 MTCYBP15-201ENST00000433123 1127 ntBASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 AL353705.1-201ENST00000433468 480 ntBASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 snoU13.24-201ENST00000458998 104 ntBASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 GAPDHP39-201ENST00000481866 979 ntBASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 AL024509.2-201ENST00000493462 493 ntBASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 AC026414.1-201ENST00000504046 698 ntBASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 AC091860.1-201ENST00000505723 432 ntBASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 ZNF415P1-201ENST00000582279 1166 ntBASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 SNORD84-203ENST00000584275 78 ntBASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 AL365400.2-201ENST00000605604 902 ntBASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 AC092650.2-201ENST00000619984 902 ntBASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 ZNF663P-202ENST00000641770 1131 ntBASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 SRP72P2-201ENST00000344851 1979 ntBASIC3.6□□□□□ -1.83
CCSER1Q9C0I3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AL355596.1-201ENST00000565399 3996 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AL079305.1-201ENST00000623159 3008 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 RNU6-50P-201ENST00000362356 103 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 RNU6-263P-201ENST00000363811 107 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 MTND4LP20-201ENST00000402379 270 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AL357075.1-201ENST00000404107 726 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 RAD23BP2-201ENST00000416003 1207 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 RPF2P1-201ENST00000424137 906 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 RPS7P2-201ENST00000435134 607 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AC241584.1-201ENST00000438469 1241 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AC000041.1-201ENST00000439655 175 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AL591503.2-201ENST00000442314 1005 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 Z75741.1-201ENST00000446793 314 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AC010285.1-201ENST00000470580 392 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 ST13P14-201ENST00000474095 734 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 HMGB1P22-201ENST00000505315 124 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AC110794.1-201ENST00000505816 425 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AC109471.1-201ENST00000511631 612 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 RPL12P22-201ENST00000519073 490 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AC006518.1-201ENST00000541449 943 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AC010198.2-201ENST00000550612 259 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 MIR4666A-201ENST00000580160 79 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 VN1R87P-201ENST00000596706 487 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AC128687.1-201ENST00000605304 619 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 YPEL5P2-201ENST00000605553 359 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 uc_338.25-201ENST00000613756 156 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms