Protein–RNA interactions for Protein: Q96Q05

TRAPPC9, Trafficking protein particle complex subunit 9, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9Q96Q05 AC011933.1-201ENST00000413334 321 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AC109780.2-201ENST00000413467 845 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AC245052.5-201ENST00000416320 649 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AIMP1P1-201ENST00000418670 937 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AL445669.1-201ENST00000426743 755 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AC114495.1-201ENST00000441274 436 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AP000542.1-201ENST00000448473 371 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 OR6K1P-201ENST00000456766 971 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 snoU13.8-201ENST00000458890 104 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AC116533.1-201ENST00000459748 321 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AP001025.2-201ENST00000490908 477 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 MTCO3P28-201ENST00000513351 515 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AC026402.1-201ENST00000513642 170 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 RNA5SP143-201ENST00000516936 115 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 NARSP2-201ENST00000518524 679 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AC090616.5-202ENST00000582111 297 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 PRELID3BP8-201ENST00000604148 295 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AC004853.1-201ENST00000604902 698 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AL365503.1-201ENST00000605247 905 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AL034351.1-201ENST00000605288 668 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 BCRP9-201ENST00000605312 388 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AC023043.4-201ENST00000612081 449 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 uc_338.32-201ENST00000615087 172 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AL158063.1-201ENST00000615349 536 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AC006378.2-201ENST00000623178 2476 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRAPPC9Q96Q05 AC092447.10-201ENST00000620607 1652 ntBASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 OR11H4-201ENST00000315409 1082 ntBASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 Y_RNA.234-201ENST00000364409 97 ntBASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 AL583834.1-201ENST00000406943 343 ntBASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 RN7SKP263-201ENST00000411194 309 ntBASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 CYCSP46-201ENST00000423569 204 ntBASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 RPL37P21-201ENST00000435890 276 ntBASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 AC239367.2-201ENST00000447309 705 ntBASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 AC060788.1-201ENST00000521318 469 ntBASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 SETP7-201ENST00000552169 453 ntBASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 MIR3160-1-201ENST00000577972 85 ntBASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 MIR4307-201ENST00000582802 84 ntBASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 MIR3138-201ENST00000585238 82 ntBASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 ARF4P1-201ENST00000605447 541 ntBASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 AC055876.5-201ENST00000605667 259 ntBASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 AC245008.1-201ENST00000608123 476 ntBASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 AL391497.1-201ENST00000608671 547 ntBASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRAPPC9Q96Q05 RPS4XP5-202ENST00000449995 1334 ntBASIC4.21□□□□□ -1.73
TRAPPC9Q96Q05 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
TRAPPC9Q96Q05 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
TRAPPC9Q96Q05 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.21□□□□□ -1.74
TRAPPC9Q96Q05 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.21□□□□□ -1.74
TRAPPC9Q96Q05 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms