Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.64□□□□□ -1.83
USP47Q96K76 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.64□□□□□ -1.83
USP47Q96K76 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.64□□□□□ -1.83
USP47Q96K76 PTP4A1P6-201ENST00000531034 478 ntBASIC3.64□□□□□ -1.83
USP47Q96K76 AC123904.3-201ENST00000547218 814 ntBASIC3.64□□□□□ -1.83
USP47Q96K76 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
USP47Q96K76 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.64□□□□□ -1.83
USP47Q96K76 AC090751.1-201ENST00000566966 267 ntBASIC3.64□□□□□ -1.83
USP47Q96K76 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.64□□□□□ -1.83
USP47Q96K76 AC113194.1-201ENST00000606037 500 ntBASIC3.64□□□□□ -1.83
USP47Q96K76 MIR6817-201ENST00000615588 66 ntBASIC3.64□□□□□ -1.83
USP47Q96K76 AC084035.1-201ENST00000634543 607 ntBASIC3.64□□□□□ -1.83
USP47Q96K76 DCAF13P1-201ENST00000495256 1330 ntBASIC3.64□□□□□ -1.83
USP47Q96K76 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.64□□□□□ -1.83
USP47Q96K76 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
USP47Q96K76 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
USP47Q96K76 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
USP47Q96K76 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
USP47Q96K76 XKRYP4-201ENST00000414395 483 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.63□□□□□ -1.83
USP47Q96K76 AIMP1P1-201ENST00000418670 937 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 RPL21P112-201ENST00000434403 463 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.63□□□□□ -1.83
USP47Q96K76 XKRYP5-201ENST00000449659 483 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 RPL36AP33-201ENST00000450395 310 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.63□□□□□ -1.83
USP47Q96K76 CEACAMP4-201ENST00000457676 421 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 AC096992.1-201ENST00000459808 709 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.63□□□□□ -1.83
USP47Q96K76 AC090071.1-201ENST00000507713 644 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 AC008565.1-201ENST00000509046 885 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 AC005351.1-201ENST00000511152 786 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.63□□□□□ -1.83
USP47Q96K76 RNU6-237P-201ENST00000515985 71 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 SNORA70.14-201ENST00000516205 110 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 RNA5SP320-201ENST00000516263 124 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 SERPINE4P-201ENST00000554978 281 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
USP47Q96K76 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.63□□□□□ -1.83
USP47Q96K76 AC092608.2-201ENST00000624427 218 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 AL049737.1-201ENST00000413920 1403 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 AP000526.1-201ENST00000603308 1388 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 OR56A5-201ENST00000340110 738 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 RNA5SP68-201ENST00000363885 119 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 SNORD115-48-201ENST00000364764 76 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 RNU1-100P-201ENST00000365255 165 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
USP47Q96K76 MIR518C-201ENST00000384822 101 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 LINC01347-201ENST00000417964 355 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 ELOCP6-201ENST00000429066 328 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 MTND4LP7-201ENST00000431728 294 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 ZNF965P-201ENST00000432501 817 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 AC023347.2-201ENST00000433994 462 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP47Q96K76 ST13P20-201ENST00000447996 1065 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.63□□□□□ -1.83
USP47Q96K76 ELOCP12-201ENST00000458706 328 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 RPL37P6-202ENST00000464216 403 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 AP002884.2-201ENST00000471647 395 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 AC012170.1-201ENST00000495139 359 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 AC096725.1-201ENST00000514266 313 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
USP47Q96K76 AP002770.2-201ENST00000543613 532 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 AC128657.1-201ENST00000549459 145 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.63□□□□□ -1.83
USP47Q96K76 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.63□□□□□ -1.83
USP47Q96K76 KATNBL1P1-201ENST00000605192 748 ntBASIC3.63□□□□□ -1.83
USP47Q96K76 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
USP47Q96K76 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
USP47Q96K76 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.62□□□□□ -1.83
USP47Q96K76 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.62□□□□□ -1.83
USP47Q96K76 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
USP47Q96K76 SNORA67.4-201ENST00000384688 142 ntBASIC3.62□□□□□ -1.83
USP47Q96K76 RNA5SP210-201ENST00000391034 120 ntBASIC3.62□□□□□ -1.83
USP47Q96K76 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.62□□□□□ -1.83
USP47Q96K76 RPS20P25-201ENST00000412447 352 ntBASIC3.62□□□□□ -1.83
USP47Q96K76 AC080125.1-201ENST00000414888 684 ntBASIC3.62□□□□□ -1.83
USP47Q96K76 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.62□□□□□ -1.83
USP47Q96K76 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.62□□□□□ -1.83
USP47Q96K76 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.62□□□□□ -1.83
USP47Q96K76 AC097499.1-201ENST00000444277 208 ntBASIC3.62□□□□□ -1.83
USP47Q96K76 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.62□□□□□ -1.83
USP47Q96K76 GAPDHP27-201ENST00000447427 1020 ntBASIC3.62□□□□□ -1.83
USP47Q96K76 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.62□□□□□ -1.83
USP47Q96K76 FDX1P2-201ENST00000450769 375 ntBASIC3.62□□□□□ -1.83
USP47Q96K76 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.62□□□□□ -1.83
USP47Q96K76 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.62□□□□□ -1.83
USP47Q96K76 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.62□□□□□ -1.83
USP47Q96K76 RNA5SP24-201ENST00000516478 95 ntBASIC3.62□□□□□ -1.83
USP47Q96K76 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.62□□□□□ -1.83
USP47Q96K76 AP001646.1-201ENST00000527936 915 ntBASIC3.62□□□□□ -1.83
USP47Q96K76 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.62□□□□□ -1.83
USP47Q96K76 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.62□□□□□ -1.83
USP47Q96K76 AC018618.2-201ENST00000604770 446 ntBASIC3.62□□□□□ -1.83
USP47Q96K76 AL392112.1-201ENST00000605115 829 ntBASIC3.62□□□□□ -1.83
USP47Q96K76 BNIP3P10-201ENST00000605360 577 ntBASIC3.62□□□□□ -1.83
USP47Q96K76 AL162233.1-201ENST00000620014 944 ntBASIC3.62□□□□□ -1.83
USP47Q96K76 AC064859.1-201ENST00000624741 174 ntBASIC3.62□□□□□ -1.83
USP47Q96K76 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms