Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RNU6-150P-201ENST00000516237 95 ntBASIC5.26□□□□□ -1.57
RTF1Q92541 MED28P5-201ENST00000528254 438 ntBASIC5.26□□□□□ -1.57
RTF1Q92541 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.26□□□□□ -1.57
RTF1Q92541 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.26□□□□□ -1.57
RTF1Q92541 EIF5A2P1-201ENST00000564027 460 ntBASIC5.26□□□□□ -1.57
RTF1Q92541 MIR4637-201ENST00000582405 84 ntBASIC5.26□□□□□ -1.57
RTF1Q92541 AC006130.2-201ENST00000586202 326 ntBASIC5.26□□□□□ -1.57
RTF1Q92541 AC126118.1-201ENST00000607744 628 ntBASIC5.26□□□□□ -1.57
RTF1Q92541 AC027807.2-201ENST00000616099 408 ntBASIC5.26□□□□□ -1.57
RTF1Q92541 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.26□□□□□ -1.57
RTF1Q92541 AL603839.4-201ENST00000624658 1005 ntBASIC5.26□□□□□ -1.57
RTF1Q92541 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.26□□□□□ -1.57
RTF1Q92541 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RTF1Q92541 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
RTF1Q92541 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RTF1Q92541 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.26□□□□□ -1.57
RTF1Q92541 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RTF1Q92541 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
RTF1Q92541 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTF1Q92541 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTF1Q92541 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTF1Q92541 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RTF1Q92541 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
RTF1Q92541 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RTF1Q92541 RNU6-921P-201ENST00000384361 107 ntBASIC5.25□□□□□ -1.57
RTF1Q92541 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.25□□□□□ -1.57
RTF1Q92541 AC009302.1-201ENST00000417147 390 ntBASIC5.25□□□□□ -1.57
RTF1Q92541 OFD1P18Y-201ENST00000420889 959 ntBASIC5.25□□□□□ -1.57
RTF1Q92541 MTND4LP11-201ENST00000422184 280 ntBASIC5.25□□□□□ -1.57
RTF1Q92541 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.25□□□□□ -1.57
RTF1Q92541 SNRPEP7-201ENST00000438350 220 ntBASIC5.25□□□□□ -1.57
RTF1Q92541 VN1R10P-201ENST00000447106 875 ntBASIC5.25□□□□□ -1.57
RTF1Q92541 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.25□□□□□ -1.57
RTF1Q92541 AC093392.2-201ENST00000450682 337 ntBASIC5.25□□□□□ -1.57
RTF1Q92541 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.25□□□□□ -1.57
RTF1Q92541 MTCO3P2-201ENST00000457365 171 ntBASIC5.25□□□□□ -1.57
RTF1Q92541 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.25□□□□□ -1.57
RTF1Q92541 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.25□□□□□ -1.57
RTF1Q92541 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.25□□□□□ -1.57
RTF1Q92541 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.25□□□□□ -1.57
RTF1Q92541 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.25□□□□□ -1.57
RTF1Q92541 AC087883.1-201ENST00000551882 391 ntBASIC5.25□□□□□ -1.57
RTF1Q92541 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.25□□□□□ -1.57
RTF1Q92541 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.25□□□□□ -1.57
RTF1Q92541 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.25□□□□□ -1.57
RTF1Q92541 CYP4A43P-201ENST00000568156 121 ntBASIC5.25□□□□□ -1.57
RTF1Q92541 BNIP3P11-201ENST00000603878 563 ntBASIC5.25□□□□□ -1.57
RTF1Q92541 PRELID3BP8-201ENST00000604148 295 ntBASIC5.25□□□□□ -1.57
RTF1Q92541 AC109347.2-201ENST00000610220 349 ntBASIC5.25□□□□□ -1.57
RTF1Q92541 AC078899.5-201ENST00000612475 178 ntBASIC5.25□□□□□ -1.57
RTF1Q92541 AC025588.4-201ENST00000615802 908 ntBASIC5.25□□□□□ -1.57
RTF1Q92541 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.25□□□□□ -1.57
RTF1Q92541 AC034229.5-201ENST00000624258 185 ntBASIC5.25□□□□□ -1.57
RTF1Q92541 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.25□□□□□ -1.57
RTF1Q92541 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTF1Q92541 ANKRD36BP1-202ENST00000604892 1417 ntBASIC5.24□□□□□ -1.57
RTF1Q92541 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.24□□□□□ -1.57
RTF1Q92541 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
RTF1Q92541 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RTF1Q92541 AL445437.1-201ENST00000623157 3087 ntBASIC5.24□□□□□ -1.57
RTF1Q92541 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.24□□□□□ -1.57
RTF1Q92541 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RTF1Q92541 RNU6-984P-201ENST00000363236 109 ntBASIC5.24□□□□□ -1.57
RTF1Q92541 Y_RNA.582-201ENST00000391023 95 ntBASIC5.24□□□□□ -1.57
RTF1Q92541 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RTF1Q92541 RN7SKP159-201ENST00000410657 292 ntBASIC5.24□□□□□ -1.57
RTF1Q92541 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.24□□□□□ -1.57
RTF1Q92541 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.24□□□□□ -1.57
RTF1Q92541 EIF4EP1-201ENST00000422311 642 ntBASIC5.24□□□□□ -1.57
RTF1Q92541 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.24□□□□□ -1.57
RTF1Q92541 IPMKP1-201ENST00000425988 855 ntBASIC5.24□□□□□ -1.57
RTF1Q92541 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.24□□□□□ -1.57
RTF1Q92541 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RTF1Q92541 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.24□□□□□ -1.57
RTF1Q92541 DNAJC19P4-201ENST00000440115 345 ntBASIC5.24□□□□□ -1.57
RTF1Q92541 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.24□□□□□ -1.57
RTF1Q92541 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5.24□□□□□ -1.57
RTF1Q92541 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.24□□□□□ -1.57
RTF1Q92541 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.24□□□□□ -1.57
RTF1Q92541 AC006517.1-201ENST00000480485 328 ntBASIC5.24□□□□□ -1.57
RTF1Q92541 AC020593.1-201ENST00000507399 299 ntBASIC5.24□□□□□ -1.57
RTF1Q92541 POU5F1P7-201ENST00000508759 541 ntBASIC5.24□□□□□ -1.57
RTF1Q92541 PPBPP1-201ENST00000510807 373 ntBASIC5.24□□□□□ -1.57
RTF1Q92541 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.24□□□□□ -1.57
RTF1Q92541 RNA5SP179-201ENST00000517284 121 ntBASIC5.24□□□□□ -1.57
RTF1Q92541 PAICSP4-201ENST00000517543 1253 ntBASIC5.24□□□□□ -1.57
RTF1Q92541 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.24□□□□□ -1.57
RTF1Q92541 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.24□□□□□ -1.57
RTF1Q92541 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RTF1Q92541 AP004247.1-201ENST00000531556 1289 ntBASIC5.24□□□□□ -1.57
RTF1Q92541 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.24□□□□□ -1.57
RTF1Q92541 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.24□□□□□ -1.57
RTF1Q92541 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RTF1Q92541 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.24□□□□□ -1.57
RTF1Q92541 HSPE1P3-201ENST00000559254 309 ntBASIC5.24□□□□□ -1.57
RTF1Q92541 HSPE1P5-201ENST00000561489 272 ntBASIC5.24□□□□□ -1.57
RTF1Q92541 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.24□□□□□ -1.57
RTF1Q92541 MIR5685-201ENST00000579080 79 ntBASIC5.24□□□□□ -1.57
RTF1Q92541 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.24□□□□□ -1.57
RTF1Q92541 AC091167.4-201ENST00000605079 184 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms