Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.21□□□□□ -1.74
HMGB4Q8WW32 AC022447.1-201ENST00000515358 464 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.21□□□□□ -1.74
HMGB4Q8WW32 IFITM8P-201ENST00000522529 394 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.21□□□□□ -1.74
HMGB4Q8WW32 EEF1B2P4-201ENST00000551398 348 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 AC090615.1-201ENST00000577519 154 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.21□□□□□ -1.74
HMGB4Q8WW32 MIR548AB-201ENST00000584917 84 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HMGB4Q8WW32 AC087752.4-201ENST00000605911 462 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 AC027807.2-201ENST00000616099 408 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.21□□□□□ -1.74
HMGB4Q8WW32 AC005086.4-201ENST00000623065 213 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
HMGB4Q8WW32 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HMGB4Q8WW32 AC092447.10-201ENST00000620607 1652 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.21□□□□□ -1.74
HMGB4Q8WW32 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.21□□□□□ -1.74
HMGB4Q8WW32 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.21□□□□□ -1.74
HMGB4Q8WW32 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.21□□□□□ -1.74
HMGB4Q8WW32 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.21□□□□□ -1.74
HMGB4Q8WW32 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.21□□□□□ -1.74
HMGB4Q8WW32 DCAF13P1-201ENST00000495256 1330 ntBASIC4.21□□□□□ -1.74
HMGB4Q8WW32 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HMGB4Q8WW32 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.2□□□□□ -1.74
HMGB4Q8WW32 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HMGB4Q8WW32 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HMGB4Q8WW32 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HMGB4Q8WW32 AL049780.3-201ENST00000624612 1583 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HMGB4Q8WW32 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.2□□□□□ -1.74
HMGB4Q8WW32 FGF7P2-201ENST00000332473 296 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 RNU6-263P-201ENST00000363811 107 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 MTCO2P34-201ENST00000421994 607 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 RPS12P5-201ENST00000423449 371 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.2□□□□□ -1.74
HMGB4Q8WW32 AC006946.1-201ENST00000429106 328 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.2□□□□□ -1.74
HMGB4Q8WW32 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.2□□□□□ -1.74
HMGB4Q8WW32 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.2□□□□□ -1.74
HMGB4Q8WW32 MTND1P28-201ENST00000435623 950 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 AC091862.1-201ENST00000438016 1100 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 AL592447.1-201ENST00000447592 540 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 AL358232.1-201ENST00000448030 501 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.2□□□□□ -1.74
HMGB4Q8WW32 AL353691.1-201ENST00000451332 387 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.2□□□□□ -1.74
HMGB4Q8WW32 RPS4XP10-201ENST00000465034 731 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 COX7A2P2-201ENST00000505291 250 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 CBX3P3-201ENST00000508108 532 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 MTND3P5-201ENST00000512798 333 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 AC116347.2-201ENST00000514912 523 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.2□□□□□ -1.74
HMGB4Q8WW32 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.2□□□□□ -1.74
HMGB4Q8WW32 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.2□□□□□ -1.74
HMGB4Q8WW32 RPL23AP97-201ENST00000568955 471 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 MIR5685-201ENST00000579080 79 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 MIR4444-1-201ENST00000581696 74 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 MIR4444-2-201ENST00000584390 74 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.2□□□□□ -1.74
HMGB4Q8WW32 AC022146.1-201ENST00000595307 847 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.2□□□□□ -1.74
HMGB4Q8WW32 U73479.1-201ENST00000618062 168 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 MTND5P3-201ENST00000438536 1800 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HMGB4Q8WW32 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HMGB4Q8WW32 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
HMGB4Q8WW32 AC092104.1-201ENST00000497346 1441 ntBASIC4.2□□□□□ -1.74
HMGB4Q8WW32 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 AC007390.2-201ENST00000606229 3803 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 RNA5SP258-201ENST00000362750 119 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 Y_RNA.234-201ENST00000364409 97 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 RNU5E-5P-201ENST00000365379 116 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 SNORD66.1-201ENST00000391230 76 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 AL513174.1-201ENST00000423182 629 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 AL589823.1-201ENST00000429577 183 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 AL445584.1-201ENST00000431451 330 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.19□□□□□ -1.74
HMGB4Q8WW32 MRPS18BP2-201ENST00000434310 759 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 RPL7P36-201ENST00000444633 681 ntBASIC4.19□□□□□ -1.74
HMGB4Q8WW32 USP9YP29-201ENST00000445112 563 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms