Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RPL23AP11-201ENST00000475260 469 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 AP000797.2-201ENST00000475768 606 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 RN7SL591P-201ENST00000496150 292 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 HMGB3P17-201ENST00000504195 649 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 AP000857.1-201ENST00000532151 543 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 AL118558.2-201ENST00000556294 238 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 MIR4691-201ENST00000583764 85 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 BNIP3P25-201ENST00000596023 559 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 AL627230.1-201ENST00000613077 211 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 AL591926.8-201ENST00000616876 211 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 AC087385.3-201ENST00000620477 187 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 uc_338.7-201ENST00000621834 124 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 AC091905.4-201ENST00000623432 202 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 THAP12P5-201ENST00000405864 2275 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 RNU6-552P-201ENST00000362869 119 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 Y_RNA.80-201ENST00000362996 102 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 RNA5SP90-201ENST00000364801 99 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 RNA5SP455-201ENST00000365190 119 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 SNORA56-201ENST00000383966 129 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 RNU6-903P-201ENST00000391270 109 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 SOD2P1-201ENST00000396543 562 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 AL606923.1-201ENST00000406616 190 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 Y_RNA.646-201ENST00000410980 101 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 ARL5AP1-201ENST00000418991 388 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 DDX39BP1-205ENST00000422507 192 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 DPH3P2-201ENST00000422618 250 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 AL360081.1-201ENST00000428299 555 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 ARL5AP4-201ENST00000430731 512 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 AC011005.3-201ENST00000491624 395 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 TRBVA-201ENST00000498804 316 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 AK3P4-201ENST00000504283 583 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 VN1R104P-201ENST00000505115 1009 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 RNA5SP228-201ENST00000516232 133 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 RNA5SP454-201ENST00000517231 127 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 COX6B1P6-201ENST00000522347 255 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 AC105224.1-201ENST00000587055 421 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 AC008814.1-201ENST00000603797 406 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 AL139124.1-201ENST00000609123 421 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 AC012409.4-201ENST00000612923 249 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 CDC27P3-201ENST00000635418 1910 ntBASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SHKBP1Q8TBC3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHKBP1Q8TBC3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHKBP1Q8TBC3 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHKBP1Q8TBC3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
SHKBP1Q8TBC3 BCORP1-203ENST00000513194 5093 ntBASIC5.43□□□□□ -1.54
SHKBP1Q8TBC3 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHKBP1Q8TBC3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHKBP1Q8TBC3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.43□□□□□ -1.54
SHKBP1Q8TBC3 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHKBP1Q8TBC3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SHKBP1Q8TBC3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms