Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 HMGN2P31-201ENST00000432430 273 ntBASIC2.13□□□□□ -2.07
NUP35Q8NFH5 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.13□□□□□ -2.07
NUP35Q8NFH5 RPL23AP74-201ENST00000437246 471 ntBASIC2.13□□□□□ -2.07
NUP35Q8NFH5 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.13□□□□□ -2.07
NUP35Q8NFH5 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.13□□□□□ -2.07
NUP35Q8NFH5 AC027673.1-201ENST00000456245 405 ntBASIC2.13□□□□□ -2.07
NUP35Q8NFH5 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.13□□□□□ -2.07
NUP35Q8NFH5 RPL32P34-201ENST00000486380 400 ntBASIC2.13□□□□□ -2.07
NUP35Q8NFH5 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.13□□□□□ -2.07
NUP35Q8NFH5 NAMPTP2-201ENST00000505629 1115 ntBASIC2.13□□□□□ -2.07
NUP35Q8NFH5 AC110794.1-201ENST00000505816 425 ntBASIC2.13□□□□□ -2.07
NUP35Q8NFH5 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.13□□□□□ -2.07
NUP35Q8NFH5 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.13□□□□□ -2.07
NUP35Q8NFH5 HMGB1P47-201ENST00000511281 589 ntBASIC2.13□□□□□ -2.07
NUP35Q8NFH5 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.13□□□□□ -2.07
NUP35Q8NFH5 SNORA31.15-201ENST00000516771 132 ntBASIC2.13□□□□□ -2.07
NUP35Q8NFH5 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.13□□□□□ -2.07
NUP35Q8NFH5 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.13□□□□□ -2.07
NUP35Q8NFH5 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.13□□□□□ -2.07
NUP35Q8NFH5 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.13□□□□□ -2.07
NUP35Q8NFH5 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.13□□□□□ -2.07
NUP35Q8NFH5 AC092470.1-201ENST00000546187 132 ntBASIC2.13□□□□□ -2.07
NUP35Q8NFH5 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC2.13□□□□□ -2.07
NUP35Q8NFH5 AC090666.1-201ENST00000578241 445 ntBASIC2.13□□□□□ -2.07
NUP35Q8NFH5 UBL5P2-201ENST00000583788 219 ntBASIC2.13□□□□□ -2.07
NUP35Q8NFH5 MIR3922-201ENST00000585192 84 ntBASIC2.13□□□□□ -2.07
NUP35Q8NFH5 AC005242.1-201ENST00000585658 438 ntBASIC2.13□□□□□ -2.07
NUP35Q8NFH5 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.13□□□□□ -2.07
NUP35Q8NFH5 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.13□□□□□ -2.07
NUP35Q8NFH5 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.13□□□□□ -2.07
NUP35Q8NFH5 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.13□□□□□ -2.07
NUP35Q8NFH5 AL137843.1-201ENST00000605078 385 ntBASIC2.13□□□□□ -2.07
NUP35Q8NFH5 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.13□□□□□ -2.07
NUP35Q8NFH5 CR381653.2-201ENST00000624041 768 ntBASIC2.13□□□□□ -2.07
NUP35Q8NFH5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.13□□□□□ -2.07
NUP35Q8NFH5 AC009501.3-201ENST00000605001 1352 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.12□□□□□ -2.07
NUP35Q8NFH5 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NUP35Q8NFH5 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.12□□□□□ -2.07
NUP35Q8NFH5 AC010733.2-201ENST00000589496 5702 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NUP35Q8NFH5 RNU6-891P-201ENST00000384280 111 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 RNU6-339P-201ENST00000384310 107 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 MIR142-201ENST00000384835 87 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 MIR627-201ENST00000384979 97 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 MIR200C-201ENST00000384980 68 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 PTMAP2-201ENST00000397627 327 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 AL353678.1-201ENST00000422735 741 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 AC097713.2-201ENST00000430199 356 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.12□□□□□ -2.07
NUP35Q8NFH5 AC005019.1-201ENST00000436455 431 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 AL645638.1-201ENST00000440519 361 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 PDSS1P2-201ENST00000449397 678 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 AC233982.1-201ENST00000451247 436 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.12□□□□□ -2.07
NUP35Q8NFH5 RPL23AP31-201ENST00000456160 467 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 RN7SL863P-201ENST00000462370 296 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.12□□□□□ -2.07
NUP35Q8NFH5 SUMO1P1-201ENST00000497904 306 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 KATNBL1P4-201ENST00000503545 918 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.12□□□□□ -2.07
NUP35Q8NFH5 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.12□□□□□ -2.07
NUP35Q8NFH5 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.12□□□□□ -2.07
NUP35Q8NFH5 MTCO3P44-201ENST00000510977 541 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.12□□□□□ -2.07
NUP35Q8NFH5 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.12□□□□□ -2.07
NUP35Q8NFH5 SNORA31.8-201ENST00000516327 108 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 HMGB1P41-201ENST00000520234 440 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.12□□□□□ -2.07
NUP35Q8NFH5 HPRT1P3-201ENST00000539521 576 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 NCAPGP2-201ENST00000557911 754 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 EIF5A2P1-201ENST00000564027 460 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 CKS1BP3-201ENST00000600888 237 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 AC015871.2-201ENST00000603605 948 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 DPRXP5-201ENST00000604662 539 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 AC106900.2-201ENST00000604994 317 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 AC013468.1-201ENST00000608680 598 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 CYCSP41-201ENST00000616920 296 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.12□□□□□ -2.07
NUP35Q8NFH5 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
NUP35Q8NFH5 AC103798.2-201ENST00000624292 632 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NUP35Q8NFH5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.12□□□□□ -2.07
NUP35Q8NFH5 AL049781.1-201ENST00000623195 3585 ntBASIC2.12□□□□□ -2.07
NUP35Q8NFH5 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
NUP35Q8NFH5 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.12□□□□□ -2.07
NUP35Q8NFH5 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.12□□□□□ -2.07
NUP35Q8NFH5 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
NUP35Q8NFH5 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
NUP35Q8NFH5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
NUP35Q8NFH5 AP000526.1-201ENST00000603308 1388 ntBASIC2.11□□□□□ -2.07
NUP35Q8NFH5 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.11□□□□□ -2.07
NUP35Q8NFH5 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.11□□□□□ -2.07
NUP35Q8NFH5 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NUP35Q8NFH5 Y_RNA.126-201ENST00000363382 111 ntBASIC2.11□□□□□ -2.07
NUP35Q8NFH5 SNORA62.3-201ENST00000365110 153 ntBASIC2.11□□□□□ -2.07
NUP35Q8NFH5 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NUP35Q8NFH5 DEFA7P-201ENST00000382676 285 ntBASIC2.11□□□□□ -2.07
NUP35Q8NFH5 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NUP35Q8NFH5 RNU4-74P-201ENST00000411280 161 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms