Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC009464.1-201ENST00000615731 469 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 AC006133.1-201ENST00000617106 264 ntBASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC50Q8IVM0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 OR1S2-201ENST00000302592 978 ntBASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 RNU6-582P-201ENST00000362989 107 ntBASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 SNORA51.2-201ENST00000364595 132 ntBASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 RNU6-339P-201ENST00000384310 107 ntBASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 SNORD116-23-201ENST00000384645 92 ntBASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 ATP5F1P3-201ENST00000397213 657 ntBASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 FNDC3CP-201ENST00000420795 1155 ntBASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 PDSS1P2-201ENST00000449397 678 ntBASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 GSTA11P-201ENST00000452866 669 ntBASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 HMGN3P1-201ENST00000453847 193 ntBASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 AL590639.1-201ENST00000456484 337 ntBASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 HMGB1P22-201ENST00000505315 124 ntBASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 AC118282.2-201ENST00000508739 374 ntBASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 RNU5A-7P-201ENST00000515979 116 ntBASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 AP003355.1-201ENST00000518956 587 ntBASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 AP004371.1-201ENST00000525240 214 ntBASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 AC010653.1-201ENST00000571108 881 ntBASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 MIR3158-1-201ENST00000583596 81 ntBASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 AL669831.4-202ENST00000590817 238 ntBASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 AC084824.5-201ENST00000612009 413 ntBASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 AF117829.1-206ENST00000621883 3802 ntBASIC3.29□□□□□ -1.88
CCDC50Q8IVM0 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 RNU1-33P-201ENST00000364249 162 ntBASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 SNORA40.4-201ENST00000390971 128 ntBASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 AL139098.1-201ENST00000407291 389 ntBASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 SNORD88.1-201ENST00000408684 91 ntBASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 VDAC1P3-201ENST00000434069 851 ntBASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 AC108734.1-201ENST00000439549 399 ntBASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 Z95327.1-201ENST00000446082 482 ntBASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 NDUFA5P7-201ENST00000452914 242 ntBASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 OR5H5P-201ENST00000503164 928 ntBASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 AC098799.1-201ENST00000504752 800 ntBASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 AC006499.5-201ENST00000505037 514 ntBASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 AC108043.1-201ENST00000512696 574 ntBASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 SNORA26.10-201ENST00000516427 141 ntBASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 CYB5AP5-201ENST00000549779 389 ntBASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 NCAPGP2-201ENST00000557911 754 ntBASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 RPL21P12-201ENST00000559810 515 ntBASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 AC023825.1-201ENST00000566704 1030 ntBASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 RPAP2P1-201ENST00000603626 1168 ntBASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 VN1R74P-201ENST00000613259 503 ntBASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 AC068722.2-201ENST00000618734 544 ntBASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
CCDC50Q8IVM0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 AC110754.1-201ENST00000399740 601 ntBASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 MTCO2P31-201ENST00000402702 684 ntBASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 AL136133.1-201ENST00000413694 376 ntBASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 FCF1P2-201ENST00000415284 583 ntBASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 HSPE1P28-201ENST00000443139 211 ntBASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 SEPT14P24-201ENST00000447236 180 ntBASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 AC092902.1-201ENST00000486999 259 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms