Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.43□□□□□ -1.7
VRK3Q8IV63 SEPT14P3-201ENST00000439401 183 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 USP9YP15-201ENST00000442391 422 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 AL732372.2-207ENST00000445840 183 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 RPL23AP43-201ENST00000446445 471 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 ARL2BPP10-201ENST00000446487 531 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VRK3Q8IV63 SEPT14P2-201ENST00000453405 183 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.43□□□□□ -1.7
VRK3Q8IV63 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
VRK3Q8IV63 AC007537.2-201ENST00000472093 511 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 AC096741.1-201ENST00000472250 846 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 AC023194.1-201ENST00000493084 308 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.43□□□□□ -1.7
VRK3Q8IV63 SEPT14P4-201ENST00000513445 186 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.43□□□□□ -1.7
VRK3Q8IV63 AC105029.1-201ENST00000520250 669 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 FO082796.1-201ENST00000523795 183 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.43□□□□□ -1.7
VRK3Q8IV63 AP003181.2-201ENST00000528941 181 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.43□□□□□ -1.7
VRK3Q8IV63 AL109766.1-201ENST00000555080 552 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.43□□□□□ -1.7
VRK3Q8IV63 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.43□□□□□ -1.7
VRK3Q8IV63 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.43□□□□□ -1.7
VRK3Q8IV63 AC091178.1-203ENST00000584586 279 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.43□□□□□ -1.7
VRK3Q8IV63 AL360085.1-201ENST00000604713 532 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 AC020634.1-201ENST00000608701 549 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 AC093838.1-201ENST00000613014 469 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 AL732618.1-201ENST00000623251 301 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
VRK3Q8IV63 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.43□□□□□ -1.7
VRK3Q8IV63 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
VRK3Q8IV63 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.43□□□□□ -1.7
VRK3Q8IV63 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
VRK3Q8IV63 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VRK3Q8IV63 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
VRK3Q8IV63 NMD3P1-201ENST00000439704 1488 ntBASIC4.43□□□□□ -1.7
VRK3Q8IV63 ERCC6-202ENST00000374127 1782 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VRK3Q8IV63 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VRK3Q8IV63 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
VRK3Q8IV63 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VRK3Q8IV63 OR51H2P-202ENST00000641424 3046 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VRK3Q8IV63 OR5J1P-201ENST00000313544 939 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VRK3Q8IV63 RNU6-359P-201ENST00000365466 108 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 RNU6-657P-201ENST00000383904 107 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 Y_RNA.419-201ENST00000384041 102 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
VRK3Q8IV63 RPS20P2-201ENST00000402520 389 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 RPL7P25-201ENST00000404151 721 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
VRK3Q8IV63 RN7SKP167-201ENST00000411047 285 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 RAB28P1-201ENST00000411517 641 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 SNRPFP1-201ENST00000414761 252 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 RPL26P29-201ENST00000415623 438 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.42□□□□□ -1.7
VRK3Q8IV63 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.42□□□□□ -1.7
VRK3Q8IV63 RPL7AP25-201ENST00000423357 805 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 OR4F13P-201ENST00000428478 931 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 OR51AB1P-201ENST00000429046 620 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.42□□□□□ -1.7
VRK3Q8IV63 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.42□□□□□ -1.7
VRK3Q8IV63 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.42□□□□□ -1.7
VRK3Q8IV63 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.42□□□□□ -1.7
VRK3Q8IV63 RNU7-136P-201ENST00000458819 69 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.42□□□□□ -1.7
VRK3Q8IV63 AC013356.1-201ENST00000489027 564 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 UBA52P3-201ENST00000491303 382 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.42□□□□□ -1.7
VRK3Q8IV63 SNORA19.2-201ENST00000516013 114 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 RNU6-327P-201ENST00000516270 127 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 RNU6-277P-201ENST00000516272 106 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.42□□□□□ -1.7
VRK3Q8IV63 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.42□□□□□ -1.7
VRK3Q8IV63 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.42□□□□□ -1.7
VRK3Q8IV63 AC011611.1-201ENST00000552179 197 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.42□□□□□ -1.7
VRK3Q8IV63 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.42□□□□□ -1.7
VRK3Q8IV63 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.42□□□□□ -1.7
VRK3Q8IV63 LINC00622-201ENST00000562811 1570 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 AC007151.1-201ENST00000572774 483 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 AC069061.3-201ENST00000582254 823 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
VRK3Q8IV63 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.42□□□□□ -1.7
VRK3Q8IV63 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
VRK3Q8IV63 SCN1A-220ENST00000641603 12506 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 CASC19-204ENST00000641001 2055 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.42□□□□□ -1.7
VRK3Q8IV63 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.42□□□□□ -1.7
VRK3Q8IV63 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VRK3Q8IV63 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VRK3Q8IV63 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms